A comprehensive survey on automatic knowledge graph construction

L Zhong, J Wu, Q Li, H Peng, X Wu - ACM Computing Surveys, 2023 - dl.acm.org
Automatic knowledge graph construction aims at manufacturing structured human
knowledge. To this end, much effort has historically been spent extracting informative fact …

Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison

B Song, F Li, Y Liu, X Zeng - Briefings in Bioinformatics, 2021 - academic.oup.com
The biomedical literature is growing rapidly, and the extraction of meaningful information
from the large amount of literature is increasingly important. Biomedical named entity …

BioBERT: a pre-trained biomedical language representation model for biomedical text mining

J Lee, W Yoon, S Kim, D Kim, S Kim, CH So… - …, 2020 - academic.oup.com
Motivation Biomedical text mining is becoming increasingly important as the number of
biomedical documents rapidly grows. With the progress in natural language processing …

Real-world data medical knowledge graph: construction and applications

L Li, P Wang, J Yan, Y Wang, S Li, J Jiang… - Artificial intelligence in …, 2020 - Elsevier
Objective Medical knowledge graph (KG) is attracting attention from both academic and
healthcare industry due to its power in intelligent healthcare applications. In this paper, we …

Multi-domain clinical natural language processing with MedCAT: the medical concept annotation toolkit

Z Kraljevic, T Searle, A Shek, L Roguski, K Noor… - Artificial intelligence in …, 2021 - Elsevier
Electronic health records (EHR) contain large volumes of unstructured text, requiring the
application of information extraction (IE) technologies to enable clinical analysis. We present …

Named entity recognition using BERT BiLSTM CRF for Chinese electronic health records

Z Dai, X Wang, P Ni, Y Li, G Li… - 2019 12th international …, 2019 - ieeexplore.ieee.org
As the generation and accumulation of massive electronic health records (EHR), how to
effectively extract the valuable medical information from EHR has been a popular research …

Chinese named entity recognition method based on BERT

Y Chang, L Kong, K Jia, Q Meng - 2021 IEEE international …, 2021 - ieeexplore.ieee.org
The word embedding of traditional named entity recognition (NER) methods can't represent
the polysemy of a word, can't fully consider contextual information, and the local features in …

[HTML][HTML] Biomedical named entity recognition using BERT in the machine reading comprehension framework

C Sun, Z Yang, L Wang, Y Zhang, H Lin… - Journal of Biomedical …, 2021 - Elsevier
Recognition of biomedical entities from literature is a challenging research focus, which is
the foundation for extracting a large amount of biomedical knowledge existing in …

Biomedical named entity recognition using deep neural networks with contextual information

H Cho, H Lee - BMC bioinformatics, 2019 - Springer
Background In biomedical text mining, named entity recognition (NER) is an important task
used to extract information from biomedical articles. Previously proposed methods for NER …

[HTML][HTML] Combinatorial feature embedding based on CNN and LSTM for biomedical named entity recognition

M Cho, J Ha, C Park, S Park - Journal of biomedical informatics, 2020 - Elsevier
With the rapid advancement of technology and the necessity of processing large amounts of
data, biomedical Named Entity Recognition (NER) has become an essential technique for …