Spatial profiling technologies illuminate the tumor microenvironment
The tumor microenvironment (TME) is composed of many different cellular and acellular
components that together drive tumor growth, invasion, metastasis, and response to …
components that together drive tumor growth, invasion, metastasis, and response to …
Spatiotemporal omics for biology and medicine
The completion of the Human Genome Project has provided a foundational blueprint for
understanding human life. Nonetheless, understanding the intricate mechanisms through …
understanding human life. Nonetheless, understanding the intricate mechanisms through …
[HTML][HTML] Spatially resolved transcriptomics: a comprehensive review of their technological advances, applications, and challenges
The ability to explore life kingdoms is largely driven by innovations and breakthroughs in
technology, from the invention of the microscope 350 years ago to the recent emergence of …
technology, from the invention of the microscope 350 years ago to the recent emergence of …
Benchmarking spatial clustering methods with spatially resolved transcriptomics data
Spatial clustering, which shares an analogy with single-cell clustering, has expanded the
scope of tissue physiology studies from cell-centroid to structure-centroid with spatially …
scope of tissue physiology studies from cell-centroid to structure-centroid with spatially …
Opportunities and challenges of single-cell and spatially resolved genomics methods for neuroscience discovery
Over the past decade, single-cell genomics technologies have allowed scalable profiling of
cell-type-specific features, which has substantially increased our ability to study cellular …
cell-type-specific features, which has substantially increased our ability to study cellular …
[HTML][HTML] Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues
The capability to spatially explore RNA biology in formalin-fixed paraffin-embedded (FFPE)
tissues holds transformative potential for histopathology research. Here, we present …
tissues holds transformative potential for histopathology research. Here, we present …
Natural uORF variation in plants
J Wang, J Liu, Z Guo - Trends in Plant Science, 2024 - cell.com
Taking advantage of natural variation promotes our understanding of phenotypic diversity
and trait evolution, ultimately accelerating plant breeding, in which the identification of …
and trait evolution, ultimately accelerating plant breeding, in which the identification of …
Single-cell analysis in rheumatic and allergic diseases: insights for clinical practice
M Nishide, H Shimagami, A Kumanogoh - Nature Reviews Immunology, 2024 - nature.com
Since the advent of single-cell RNA sequencing (scRNA-seq) methodology, single-cell
analysis has become a powerful tool for exploration of cellular networks and dysregulated …
analysis has become a powerful tool for exploration of cellular networks and dysregulated …
Spatial omics advances for in situ RNA biology
Spatial regulation of RNA plays a critical role in gene expression regulation and cellular
function. Understanding spatially resolved RNA dynamics and translation is vital for bringing …
function. Understanding spatially resolved RNA dynamics and translation is vital for bringing …
Decoding protein–RNA interactions using CLIP-based methodologies
Protein–RNA interactions are central to all RNA processing events, with pivotal roles in the
regulation of gene expression and cellular functions. Dysregulation of these interactions has …
regulation of gene expression and cellular functions. Dysregulation of these interactions has …