Blockage of the monoamine oxidase by a natural compound to overcome parkinson's disease via computational biology

M Sherafatizangeneh, C Farshadfar… - Journal of …, 2022 - World Scientific
The dopamine (DA) metabolism changes are significant in Parkinson's disease (PD). Levels
of monoamine oxidases (MAOs) play a critical role in DA metabolism and oxidative damage …

Probing the acting mode and advantages of RMC-4550 as an Src-homology 2 domain-containing protein tyrosine phosphatase (SHP2) inhibitor at molecular level …

RR Wang, WS Liu, L Zhou, Y Ma… - Journal of Biomolecular …, 2020 - Taylor & Francis
The over-activation of Ras/mitogen-activated protein kinase (MAPK) signaling pathway
associated with a variety of cancers is usually related with abnormal activation of Src …

Exploring the effect of inhibitor AKB‐9778 on VE‐PTP by molecular docking and molecular dynamics simulation

WS Liu, RR Wang, YZ Sun, WY Li, HL Li… - Journal of Cellular …, 2019 - Wiley Online Library
Diabetic macular edema, also known as diabetic eye disease, is mainly caused by the
overexpression of vascular endothelial protein tyrosine phosphatase (VE‐PTP) at …

[HTML][HTML] The SARS-Cov-2 Proliferation blocked by a novel and potent main protease inhibitor via computer-aided drug design

S Shayan, S Jamaran, RH Askandar… - Iranian Journal of …, 2021 - ncbi.nlm.nih.gov
The recent prevalence of novel “coronavirus disease 2019” has expanded quickly globally,
causing a universal pandemic. Herein, an effort was constructed to design a potent drug to …

In silico identification of natural product inhibitors against Octamer-binding transcription factor 4 (Oct4) to impede the mechanism of glioma stem cells

C Nayak, SK Singh - Plos one, 2021 - journals.plos.org
Octamer-binding transcription factor 4 (Oct4) is a core regulator in the retention of stemness,
invasive, and self-renewal properties in glioma initiating cells (GSCs) and its overexpression …

Whole proteome screening and identification of potential epitopes of SARS-CoV-2 for vaccine design-an immunoinformatic, molecular docking and molecular …

MMA Ezaj, M Junaid, Y Akter, A Nahrin… - Journal of …, 2022 - Taylor & Francis
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the most cryptic pandemic
outbreak of the 21st century, has gripped more than 1.8 million people to death and infected …

Evaluation of Sox2 binding affinities for distinct DNA patterns using steered molecular dynamics simulation

D Yesudhas, MA Anwar, S Panneerselvam… - FEBS open …, 2017 - Wiley Online Library
Transcription factors (TF s) are gene expression regulators that bind to DNA in a sequence‐
specific manner and determine the functional characteristics of the gene. It is worthwhile to …

Computational Insights into the Deleterious Impacts of Missense Variants on N-Acetyl-d-glucosamine Kinase Structure and Function

R Dash, S Mitra, YA Munni, HJ Choi, MC Ali… - International Journal of …, 2021 - mdpi.com
An enzyme of the mammalian amino-sugar metabolism pathway, N-acetylglucosamine
kinase (NAGK), that synthesizes N-acetylglucosamine (GlcNAc)-6-phosphate, is reported to …

Prevention of SARS-CoV-2 proliferation with a novel and potent main protease inhibitor by docking, ADMET, MM-PBSA, and molecular dynamics simulation

A Noorbakhsh, RH Askandar, MS Alhagh… - Journal of …, 2021 - World Scientific
COVID-19 is the last disease caused by SARS-CoV-2 associated with a severe immune
response and lung damage. The main protease (Mpro) has a vital role in SARS-CoV-2 …

Design, synthesis, biological evaluation and molecular dynamics studies of 4-thiazolinone derivatives as protein tyrosine phosphatase 1B (PTP1B) inhibitors

WS Liu, RR Wang, H Yue, ZH Zheng… - Journal of …, 2020 - Taylor & Francis
Protein tyrosine phosphatase 1B (PTP1B) is a key negative regulator of insulin signaling
pathway, and more and more studies have shown that it is a potential target for the treatment …