The evolution of mechanisms involved in vertebrate endothermy

LJ Legendre, D Davesne - Philosophical Transactions of …, 2020 - royalsocietypublishing.org
Endothermy, ie the endogenous production of metabolic heat, has evolved multiple times
among vertebrates, and several strategies of heat production have been studied extensively …

Phylogenomic analysis of trichomycterid catfishes (Teleostei: Siluriformes) inferred from ultraconserved elements

LE Ochoa, A Datovo, C DoNascimiento, FF Roxo… - Scientific reports, 2020 - nature.com
The family Trichomycteridae is one of the most diverse groups of freshwater catfishes in
South and Central America with eight subfamilies, 41 genera and more than 300 valid …

Phylogenetic classification of bony fishes

R Betancur-R, EO Wiley, G Arratia, A Acero… - BMC evolutionary …, 2017 - Springer
Background Fish classifications, as those of most other taxonomic groups, are being
transformed drastically as new molecular phylogenies provide support for natural groups …

Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data

LC Hughes, G Ortí, Y Huang, Y Sun… - Proceedings of the …, 2018 - pnas.org
Our understanding of phylogenetic relationships among bony fishes has been transformed
by analysis of a small number of genes, but uncertainty remains around critical nodes …

Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)

TC Glenn, RA Nilsen, TJ Kieran, JG Sanders… - PeerJ, 2019 - peerj.com
Massively parallel DNA sequencing offers many benefits, but major inhibitory cost factors
include:(1) start-up (ie, purchasing initial reagents and equipment);(2) buyin (ie, getting the …

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

A Ghezelayagh, RC Harrington, ED Burress… - Nature Ecology & …, 2022 - nature.com
Spiny-rayed fishes (Acanthomorpha) dominate modern marine habitats and account for
more than a quarter of all living vertebrate species. Previous time-calibrated phylogenies …

Phylogenetic classification of living and fossil ray-finned fishes (Actinopterygii)

TJ Near, CE Thacker - Bulletin of the Peabody Museum of Natural History, 2024 - BioOne
Classification of the tremendous diversity of ray-finned fishes (Actinopterygii) began with the
designation of taxonomic groups on the basis of morphological similarity. Starting in the late …

Explosive diversification of marine fishes at the Cretaceous–Palaeogene boundary

ME Alfaro, BC Faircloth, RC Harrington… - Nature ecology & …, 2018 - nature.com
Abstract The Cretaceous–Palaeogene (K–Pg) mass extinction is linked to the rapid
emergence of ecologically divergent higher taxa (for example, families and orders) across …

Estimating improved partitioning schemes for ultraconserved elements

VA Tagliacollo, R Lanfear - Molecular biology and evolution, 2018 - academic.oup.com
Ultraconserved (UCEs) are popular markers for phylogenomic studies. They are relatively
simple to collect from distantly-related organisms, and contain sufficient information to infer …

Integration drives rapid phenotypic evolution in flatfishes

KM Evans, O Larouche, SJ Watson, S Farina… - Proceedings of the …, 2021 - pnas.org
Evolutionary innovations are scattered throughout the tree of life, and have allowed the
organisms that possess them to occupy novel adaptive zones. While the impacts of these …