Review of statistical learning methods in integrated omics studies (an integrated information science)

ISL Zeng, T Lumley - Bioinformatics and biology insights, 2018 - journals.sagepub.com
Integrated omics is becoming a new channel for investigating the complex molecular system
in modern biological science and sets a foundation for systematic learning for precision …

An improved discriminative filter bank selection approach for motor imagery EEG signal classification using mutual information

S Kumar, A Sharma, T Tsunoda - BMC bioinformatics, 2017 - Springer
Background Common spatial pattern (CSP) has been an effective technique for feature
extraction in electroencephalography (EEG) based brain computer interfaces (BCIs) …

Multi-view kernel spectral clustering

L Houthuys, R Langone, JAK Suykens - Information Fusion, 2018 - Elsevier
In multi-view clustering, datasets are comprised of different representations of the data, or
views. Although each view could individually be used, exploiting information from all views …

CSP-TSM: Optimizing the performance of Riemannian tangent space map** using common spatial pattern for MI-BCI

S Kumar, K Mamun, A Sharma - Computers in biology and medicine, 2017 - Elsevier
Background Classification of electroencephalography (EEG) signals for motor imagery
based brain computer interface (MI-BCI) is an exigent task and common spatial pattern …

Exploring pathways to purpose in scouts

A Rush, J Brown Urban, WJ Davis… - Journal of Adolescent …, 2024 - journals.sagepub.com
Youth purpose was investigated using a two-phase embedded design with youth
participating in Scouts BSA (N= 3,943), ages 9–20 (M= 14.0, SD= 1.9). Participating Scouts …

Integration of Meta-Multi-Omics Data Using Probabilistic Graphs and External Knowledge

H Can, SK Chanumolu, BD Nielsen, S Alvarez… - Cells, 2023 - mdpi.com
Multi-omics has the promise to provide a detailed molecular picture of biological systems.
Although obtaining multi-omics data is relatively easy, methods that analyze such data have …

SPECTRA: a tool for enhanced brain wave signal recognition

S Kumar, T Tsunoda, A Sharma - BMC bioinformatics, 2021 - Springer
Background Brain wave signal recognition has gained increased attention in neuro-
rehabilitation applications. This has driven the development of brain–computer interface …

Integration of Multi-Omics Data Using Probabilistic Graph Models and External Knowledge

BA Tripp, HH Otu - Current Bioinformatics, 2022 - ingentaconnect.com
Background: High-throughput sequencing technologies have revolutionized the ability to
perform systems-level biology and elucidate molecular mechanisms of disease through the …

PCA via joint graph Laplacian and sparse constraint: Identification of differentially expressed genes and sample clustering on gene expression data

CM Feng, Y Xu, MX Hou, LY Dai, JL Shang - BMC bioinformatics, 2019 - Springer
Background In recent years, identification of differentially expressed genes and sample
clustering have become hot topics in bioinformatics. Principal Component Analysis (PCA) is …

2D–EM clustering approach for high-dimensional data through folding feature vectors

A Sharma, PJ Kamola, T Tsunoda - BMC bioinformatics, 2017 - Springer
Background Clustering methods are becoming widely utilized in biomedical research where
the volume and complexity of data is rapidly increasing. Unsupervised clustering of patient …