Machine learning in electron microscopy for advanced nanocharacterization: current developments, available tools and future outlook

M Botifoll, I Pinto-Huguet, J Arbiol - Nanoscale Horizons, 2022 - pubs.rsc.org
In the last few years, electron microscopy has experienced a new methodological paradigm
aimed to fix the bottlenecks and overcome the challenges of its analytical workflow. Machine …

Extracellular matrix mechanobiology in cancer cell migration

J Vasudevan, K Jiang, JG Fernandez, CT Lim - Acta biomaterialia, 2023 - Elsevier
The extracellular matrix (ECM) is pivotal in modulating tumor progression. Besides
chemically stimulating tumor cells, it also offers physical support that orchestrates the …

Spatiotemporal dynamics of PIEZO1 localization controls keratinocyte migration during wound healing

JR Holt, WZ Zeng, EL Evans, SH Woo, S Ma… - Elife, 2021 - elifesciences.org
Keratinocytes, the predominant cell type of the epidermis, migrate to reinstate the epithelial
barrier during wound healing. Mechanical cues are known to regulate keratinocyte re …

Orientation-invariant autoencoders learn robust representations for shape profiling of cells and organelles

J Burgess, JJ Nirschl, MC Zanellati, A Lozano… - Nature …, 2024 - nature.com
Cell and organelle shape are driven by diverse genetic and environmental factors and thus
accurate quantification of cellular morphology is essential to experimental cell biology …

Pressure and stiffness sensing together regulate vascular smooth muscle cell phenotype switching

P Swiatlowska, B Sit, Z Feng, E Marhuenda… - Science …, 2022 - science.org
Vascular smooth muscle cells (VSMCs) play a central role in the progression of
atherosclerosis, where they switch from a contractile to a synthetic phenotype. Because of …

[HTML][HTML] AI-driven 3D bioprinting for regenerative medicine: from bench to bedside

Z Zhang, X Zhou, Y Fang, Z **ong, T Zhang - Bioactive Materials, 2025 - Elsevier
In recent decades, 3D bioprinting has garnered significant research attention due to its
ability to manipulate biomaterials and cells to create complex structures precisely. However …

Classification of circulating tumor cell clusters by morphological characteristics using convolutional neural network-support vector machine

J Park, SM Ha, J Kim, JW Song, KA Hyun… - Sensors and Actuators B …, 2024 - Elsevier
Metastasis is the leading cause of cancer-associated deaths, and the circulating tumor cell
(CTC) cluster plays a significant role as a precursor to metastasis. Thus, there is a great …

Mechanical tension mobilizes Lgr6+ epidermal stem cells to drive skin growth

Y Xue, C Lyu, A Taylor, A Van Ee, A Kiemen… - Science …, 2022 - science.org
Uniquely among mammalian organs, skin is capable of marked size change in adults, yet
the mechanisms underlying this notable capacity are unclear. Here, we use a system of …

VistoSeg: Processing utilities for high-resolution images for spatially resolved transcriptomics data

M Tippani, HR Divecha, JL Catallini II, SH Kwon… - Biological …, 2023 - cambridge.org
Spatially resolved transcriptomics (SRT) is a growing field that links gene expression to
anatomical context. SRT approaches that use next-generation sequencing (NGS) combine …

Disruption of NEUROD2 causes a neurodevelopmental syndrome with autistic features via cell-autonomous defects in forebrain glutamatergic neurons

K Runge, R Mathieu, S Bugeon, S Lafi, C Beurrier… - Molecular …, 2021 - nature.com
While the transcription factor NEUROD2 has recently been associated with epilepsy, its
precise role during nervous system development remains unclear. Using a multi-scale …