Genome regulation by polycomb and trithorax: 70 years and counting

B Schuettengruber, HM Bourbon, L Di Croce, G Cavalli - Cell, 2017 - cell.com
Polycomb (PcG) and Trithorax (TrxG) group proteins are evolutionarily conserved chromatin-
modifying factors originally identified as part of an epigenetic cellular memory system that …

[HTML][HTML] The non-canonical aspects of microRNAs: many roads to gene regulation

CJ Stavast, SJ Erkeland - Cells, 2019 - mdpi.com
MicroRNAs (miRNAs) are critical regulators of gene expression. As miRNAs are frequently
deregulated in many human diseases, including cancer and immunological disorders, it is …

Transcriptional regulation by Polycomb group proteins

L Di Croce, K Helin - Nature structural & molecular biology, 2013 - nature.com
Polycomb group (PcG) proteins are epigenetic regulators of transcription that have key roles
in stem-cell identity, differentiation and disease. Mechanistically, they function within …

The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution

JJ Smith, N Timoshevskaya, C Ye, C Holt, MC Keinath… - Nature …, 2018 - nature.com
The sea lamprey (Petromyzon marinus) serves as a comparative model for reconstructing
vertebrate evolution. To enable more informed analyses, we developed a new assembly of …

[HTML][HTML] Polycomb-dependent H3K27me1 and H3K27me2 regulate active transcription and enhancer fidelity

KJ Ferrari, A Scelfo, SG Jammula, A Cuomo, I Barozzi… - Molecular cell, 2014 - cell.com
H3K27me3 is deposited at promoters by the preferential association of Polycomb repressive
complex 2 (PRC2) with CpG-rich DNA elements regulating development by repressing gene …

Analysis of transcriptional variability in a large human iPSC library reveals genetic and non-genetic determinants of heterogeneity

I Carcamo-Orive, GE Hoffman, P Cundiff… - Cell stem cell, 2017 - cell.com
Variability in induced pluripotent stem cell (iPSC) lines remains a concern for disease
modeling and regenerative medicine. We have used RNA-sequencing analysis and linear …

Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia

SN Sansom, N Shikama-Dorn, S Zhanybekova… - Genome …, 2014 - genome.cshlp.org
Promiscuous gene expression (PGE) by thymic epithelial cells (TEC) is essential for
generating a diverse T cell antigen receptor repertoire tolerant to self-antigens, and thus for …

Common stemness regulators of embryonic and cancer stem cells

C Hadjimichael, K Chanoumidou… - World journal of …, 2015 - pmc.ncbi.nlm.nih.gov
Pluripotency of embryonic stem cells (ESCs) and induced pluripotent stem cells is regulated
by a well characterized gene transcription circuitry. The circuitry is assembled by ESC …

AMPK improves gut epithelial differentiation and barrier function via regulating Cdx2 expression

X Sun, Q Yang, CJ Rogers, M Du, MJ Zhu - Cell Death & Differentiation, 2017 - nature.com
Impairment in gut epithelial integrity and barrier function is associated with many diseases.
The homeostasis of intestinal barrier is based on a delicate regulation of epithelial …

Epigenetic regulation of pluripotency and differentiation

MJ Boland, KL Nazor, JF Loring - Circulation research, 2014 - ahajournals.org
The precise, temporal order of gene expression during development is critical to ensure
proper lineage commitment, cell fate determination, and ultimately, organogenesis …