[LIBRO][B] Environmental DNA: For biodiversity research and monitoring

P Taberlet, A Bonin, L Zinger, E Coissac - 2018 - books.google.com
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …

The utility of macroecological rules for microbial biogeography

JR Dickey, RA Swenie, SC Turner… - Frontiers in Ecology …, 2021 - frontiersin.org
Macroecological rules have been developed for plants and animals that describe large-
scale distributional patterns and attempt to explain the underlying physiological and …

Biogeography of viruses in the sea

CET Chow, CA Suttle - Annual review of virology, 2015 - annualreviews.org
Viral ecology is a rapidly progressing area of research, as molecular methods have
improved significantly for targeted research on specific populations and whole communities …

pH as a primary control in environmental microbiology: 1. thermodynamic perspective

Q **, MF Kirk - Frontiers in Environmental Science, 2018 - frontiersin.org
pH influences the occurrence and distribution of microorganisms. Microbes typically live
over a range of 3–4 pH units and are described as acidophiles, neutrophiles, and …

Macroecological laws describe variation and diversity in microbial communities

J Grilli - Nature communications, 2020 - nature.com
How the coexistence of many species is maintained is a fundamental and unresolved
question in ecology. Coexistence is a puzzle because we lack a mechanistic understanding …

Global dispersion and local diversification of the methane seep microbiome

SE Ruff, JF Biddle, AP Teske, K Knittel… - Proceedings of the …, 2015 - National Acad Sciences
Methane seeps are widespread seafloor ecosystems shaped by the emission of gas from
seabed reservoirs. The microorganisms inhabiting methane seeps transform the chemical …

VAMPS: a website for visualization and analysis of microbial population structures

SM Huse, DB Mark Welch, A Voorhis, A Shipunova… - BMC …, 2014 - Springer
Background The advent of next-generation DNA sequencing platforms has revolutionized
molecular microbial ecology by making the detailed analysis of complex communities over …

Global biogeography of marine fungi is shaped by the environment

KH Tisthammer, GM Cobian, AS Amend - Fungal Ecology, 2016 - Elsevier
Fungi are essential components of marine ecosystems, yet very little is known about their
global distribution and diversity in the marine environment. In this study, we analyzed marine …

Marine bacteria exhibit a bipolar distribution

WJ Sul, TA Oliver, HW Ducklow… - Proceedings of the …, 2013 - National Acad Sciences
The microbial cosmopolitan dispersion hypothesis often invoked to explain distribution
patterns driven by high connectivity of oceanographic water masses and widespread …

Ecological mechanisms and current systems shape the modular structure of the global oceans' prokaryotic seascape

F Milke, J Meyerjürgens, M Simon - Nature Communications, 2023 - nature.com
Major biogeographic features of the microbial seascape in the oceans have been
established and their underlying ecological mechanisms in the (sub) tropical oceans and the …