An integrative view of phylogenetic comparative methods: connections to population genetics, community ecology, and paleobiology
Recent innovations in phylogenetic comparative methods (PCMs) have spurred a
renaissance of research into the causes and consequences of large‐scale patterns of …
renaissance of research into the causes and consequences of large‐scale patterns of …
A total-evidence approach to dating with fossils, applied to the early radiation of the Hymenoptera
Phylogenies are usually dated by calibrating interior nodes against the fossil record. This
relies on indirect methods that, in the worst case, misrepresent the fossil information. Here …
relies on indirect methods that, in the worst case, misrepresent the fossil information. Here …
Does phylogeny matter? Assessing the impact of phylogenetic information in ecological meta‐analysis
Meta‐analysis is increasingly used in ecology and evolutionary biology. Yet, in these fields
this technique has an important limitation: phylogenetic non‐independence exists among …
this technique has an important limitation: phylogenetic non‐independence exists among …
Taxon sampling and the accuracy of phylogenetic analyses
Appropriate and extensive taxon sampling is one of the most important determinants of
accurate phylogenetic estimation. In addition, accuracy of inferences about evolutionary …
accurate phylogenetic estimation. In addition, accuracy of inferences about evolutionary …
[BOOK][B] Phylogeny: discrete and random processes in evolution
M Steel - 2016 - SIAM
The idea that all life on earth traces back to a common origin dates back at least to Charles
Darwin's Origin of Species. Ever since, biologists have tried to piece together parts of this …
Darwin's Origin of Species. Ever since, biologists have tried to piece together parts of this …
Prioritizing phylogenetic diversity captures functional diversity unreliably
In the face of the biodiversity crisis, it is argued that we should prioritize species in order to
capture high functional diversity (FD). Because species traits often reflect shared …
capture high functional diversity (FD). Because species traits often reflect shared …
Amazonian amphibian diversity is primarily derived from late Miocene Andean lineages
The Neotropics contains half of remaining rainforests and Earth's largest reservoir of
amphibian biodiversity. However, determinants of Neotropical biodiversity (ie, vicariance …
amphibian biodiversity. However, determinants of Neotropical biodiversity (ie, vicariance …
Density-dependent cladogenesis in birds
A characteristic signature of adaptive radiation is a slowing of the rate of speciation toward
the present. On the basis of molecular phylogenies, studies of single clades have frequently …
the present. On the basis of molecular phylogenies, studies of single clades have frequently …
[PDF][PDF] Phylogenetic comparative methods: learning from trees
L Harmon - 2019 - ecoevorxiv.org
Evolution is happening all around us. In many cases–lately, due to technological advances
in molecular biology–scientists can now describe the evolutionary process in exquisite …
in molecular biology–scientists can now describe the evolutionary process in exquisite …
[BOOK][B] Computational phylogenetics: an introduction to designing methods for phylogeny estimation
T Warnow - 2018 - books.google.com
A comprehensive account of both basic and advanced material in phylogeny estimation,
focusing on computational and statistical issues. No background in biology or computer …
focusing on computational and statistical issues. No background in biology or computer …