The Evolutionary Interplay of Somatic and Germline Mutation Rates

AC Beichman, L Zhu, K Harris - Annual Review of Biomedical …, 2024 - annualreviews.org
Novel sequencing technologies are making it increasingly possible to measure the mutation
rates of somatic cell lineages. Accurate germline mutation rate measurement technologies …

The mutagenic consequences of defective DNA repair

E Németh, D Szüts - DNA repair, 2024 - Elsevier
Multiple separate repair mechanisms safeguard the genome against various types of DNA
damage, and their failure can increase the rate of spontaneous mutagenesis. The …

An expanding universe of mutational signatures and its rapid evolution in single-stranded RNA viruses

Y Yang, X Zhang, T Chen, F Wu… - Molecular Biology …, 2025 - academic.oup.com
The study of mutational processes in somatic genomes has gained recent momentum,
uncovering a wide array of endogenous and exogenous factors associated with somatic …

Deciphering the Foundations of Mitochondrial Mutational Spectra: Replication-Driven and Damage-Induced Signatures Across Chordate Classes

D Iliushchenko, B Efimenko… - Molecular Biology …, 2025 - academic.oup.com
Mitochondrial DNA (mtDNA) mutagenesis remains poorly understood despite its crucial role
in disease, aging, and evolutionary tracing. In this study, we reconstructed a comprehensive …

NeMu: a comprehensive pipeline for accurate reconstruction of neutral mutation spectra from evolutionary data

B Efimenko, K Popadin, K Gunbin - Nucleic Acids Research, 2024 - academic.oup.com
The recognized importance of mutational spectra in molecular evolution is yet to be fully
exploited beyond human cancer studies and model organisms. The wealth of intraspecific …

Low mutation rate but high male-bias in the germline of a short-lived opossum

Y Pena-Garcia, R Wang, M Raveendran, RA Harris… - bioRxiv, 2024 - biorxiv.org
Age and sex have been found to be important determinants of the mutation rate per
generation in mammals, but the mechanisms underlying these factors are still unclear. One …

The evolution of mutation rates in the light of development and cell-lineage selection

P Majic, M Srivastava, J Crocker - bioRxiv, 2025 - biorxiv.org
Mutation rates drive the pace and potential of evolutionary change. However, to better
understand the evolutionary implications of mutation rates, there is a need to uncover the …

Robust inference of historical human generation times

RJ Wang, J Rogers, MW Hahn - bioRxiv, 2023 - biorxiv.org
Abstract raise concerns about our recent estimates of historical human generation times,
concluding that our results were “predominantly driven by nonbiological artifacts.” While we …