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Modern Bayesian experimental design
Bayesian experimental design (BED) provides a powerful and general framework for
optimizing the design of experiments. However, its deployment often poses substantial …
optimizing the design of experiments. However, its deployment often poses substantial …
Advances in variational inference
Many modern unsupervised or semi-supervised machine learning algorithms rely on
Bayesian probabilistic models. These models are usually intractable and thus require …
Bayesian probabilistic models. These models are usually intractable and thus require …
On variational bounds of mutual information
Abstract Estimating and optimizing Mutual Information (MI) is core to many problems in
machine learning, but bounding MI in high dimensions is challenging. To establish tractable …
machine learning, but bounding MI in high dimensions is challenging. To establish tractable …
Ultra-large library docking for discovering new chemotypes
Despite intense interest in expanding chemical space, libraries containing hundreds-of-
millions to billions of diverse molecules have remained inaccessible. Here we investigate …
millions to billions of diverse molecules have remained inaccessible. Here we investigate …
Virtual adversarial training: a regularization method for supervised and semi-supervised learning
We propose a new regularization method based on virtual adversarial loss: a new measure
of local smoothness of the conditional label distribution given input. Virtual adversarial loss …
of local smoothness of the conditional label distribution given input. Virtual adversarial loss …
Disentangling disentanglement in variational autoencoders
We develop a generalisation of disentanglement in variational autoencoders (VAEs)—
decomposition of the latent representation—characterising it as the fulfilment of two factors …
decomposition of the latent representation—characterising it as the fulfilment of two factors …
Optimal experimental design: Formulations and computations
Questions of 'how best to acquire data'are essential to modelling and prediction in the
natural and social sciences, engineering applications, and beyond. Optimal experimental …
natural and social sciences, engineering applications, and beyond. Optimal experimental …
Gflownets for ai-driven scientific discovery
Tackling the most pressing problems for humanity, such as the climate crisis and the threat
of global pandemics, requires accelerating the pace of scientific discovery. While science …
of global pandemics, requires accelerating the pace of scientific discovery. While science …
An introduction to probabilistic programming
This book is a graduate-level introduction to probabilistic programming. It not only provides a
thorough background for anyone wishing to use a probabilistic programming system, but …
thorough background for anyone wishing to use a probabilistic programming system, but …
Deep adaptive design: Amortizing sequential bayesian experimental design
Abstract We introduce Deep Adaptive Design (DAD), a method for amortizing the cost of
adaptive Bayesian experimental design that allows experiments to be run in real-time …
adaptive Bayesian experimental design that allows experiments to be run in real-time …