Harnessing multimodal data integration to advance precision oncology

KM Boehm, P Khosravi, R Vanguri, J Gao… - Nature Reviews …, 2022 - nature.com
Advances in quantitative biomarker development have accelerated new forms of data-driven
insights for patients with cancer. However, most approaches are limited to a single mode of …

Assessing tumor-infiltrating lymphocytes in solid tumors: a practical review for pathologists and proposal for a standardized method from the International Immuno …

S Hendry, R Salgado, T Gevaert… - Advances in anatomic …, 2017 - journals.lww.com
Assessment of the immune response to tumors is growing in importance as the prognostic
implications of this response are increasingly recognized, and as immunotherapies are …

Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial

DB Keskin, AJ Anandappa, J Sun, I Tirosh… - Nature, 2019 - nature.com
Neoantigens, which are derived from tumour-specific protein-coding mutations, are exempt
from central tolerance, can generate robust immune responses, and can function as bona …

[HTML][HTML] Spatial organization and molecular correlation of tumor-infiltrating lymphocytes using deep learning on pathology images

J Saltz, R Gupta, L Hou, T Kurc, P Singh, V Nguyen… - Cell reports, 2018 - cell.com
Beyond sample curation and basic pathologic characterization, the digitized H&E-stained
images of TCGA samples remain underutilized. To highlight this resource, we present …

Molecular heterogeneity and immunosuppressive microenvironment in glioblastoma

S DeCordova, A Shastri, AG Tsolaki, H Yasmin… - Frontiers in …, 2020 - frontiersin.org
Glioblastoma (GBM) is the most aggressive primary brain tumor in adults, with a poor
prognosis, despite surgical resection combined with radio-and chemotherapy. The major …

Randomized phase II and biomarker study of pembrolizumab plus bevacizumab versus pembrolizumab alone for patients with recurrent glioblastoma

L Nayak, AM Molinaro, K Peters, JL Clarke… - Clinical Cancer …, 2021 - aacrjournals.org
Purpose: VEGF is upregulated in glioblastoma and may contribute to immunosuppression.
We performed a phase II study of pembrolizumab alone or with bevacizumab in recurrent …

The landscape of the mesenchymal signature in brain tumours

J Behnan, G Finocchiaro, G Hanna - Brain, 2019 - academic.oup.com
The complexity of glioblastoma multiforme, the most common and lethal variant of gliomas,
is reflected by cellular and molecular heterogeneity at both the inter-and intra-tumoural …

Molecular and genetic properties of tumors associated with local immune cytolytic activity

MS Rooney, SA Shukla, CJ Wu, G Getz, N Hacohen - Cell, 2015 - cell.com
How the genomic landscape of a tumor shapes and is shaped by anti-tumor immunity has
not been systematically explored. Using large-scale genomic data sets of solid tissue tumor …

[HTML][HTML] Pathological and molecular features of glioblastoma and its peritumoral tissue

A D'Alessio, G Proietti, G Sica, BM Scicchitano - Cancers, 2019 - mdpi.com
Glioblastoma (GBM) is one of the most aggressive and lethal human brain tumors. At
present, GBMs are divided in primary and secondary on the basis of the mutational status of …