The skin microbiome: Associations between altered microbial communities and disease

LS Weyrich, S Dixit, AG Farrer… - Australasian journal …, 2015 - Wiley Online Library
A single square centimetre of the human skin can contain up to one billion microorganisms.
These diverse communities of bacteria, fungi, mites and viruses can provide protection …

[HTML][HTML] Emerging trends for microbiome analysis: from single-cell functional imaging to microbiome big data

J Xu, B Ma, X Su, S Huang, X Xu, X Zhou, WE Huang… - Engineering, 2017 - Elsevier
Method development has always been and will continue to be a core driving force of
microbiome science. In this perspective, we argue that in the next decade, method …

A graphical framework for model selection criteria and significance tests: refutation, confirmation and ecology

K Aho, D Derryberry, T Peterson - Methods in Ecology and …, 2017 - Wiley Online Library
In this study, we use a novel graphical heuristic to compare the way four methods:
significance testing, two popular information‐theoretic approaches (AIC and BIC) and …

Meta-QC-Chain: comprehensive and fast quality control method for metagenomic data

Q Zhou, X Su, G **g, K Ning - Genomics, Proteomics and …, 2014 - academic.oup.com
Next-generation sequencing (NGS) technology has revolutionized and significantly
impacted metagenomic research. However, the NGS data usually contains sequencing …

CoVennTree: a new method for the comparative analysis of large datasets

SC Lott, B Voß, WR Hess, C Steglich - Frontiers in genetics, 2015 - frontiersin.org
The visualization of massive datasets, such as those resulting from comparative
metatranscriptome analyses or the analysis of microbial population structures using …

Rapid comparison and correlation analysis among massive number of microbial community samples based on MDV data model

X Su, J Hu, S Huang, K Ning - Scientific reports, 2014 - nature.com
The research in microbial communities would potentially impact a vast number of
applications in “bio”-related disciplines. Large-scale analyses became a clear trend in …

Keanu: a novel visualization tool to explore biodiversity in metagenomes

A Thrash, M Arick, RA Barbato, RM Jones… - BMC …, 2019 - Springer
Background One of the main challenges when analyzing complex metagenomics data is the
fact that large amounts of information need to be presented in a comprehensive and easy-to …

Porcine JAB1 significantly enhances apoptosis induced by staurosporine

P Jiang, J Wang, Z Kang, D Li, D Zhang - Cell Death & Disease, 2013 - nature.com
Abstract c-Jun activation domain-binding protein-1 (JAB1), also known as the subunit 5 of
the COP9 signalosome, is a multifunctional protein that regulates cell proliferation, apoptosis …