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The skin microbiome: Associations between altered microbial communities and disease
LS Weyrich, S Dixit, AG Farrer… - Australasian journal …, 2015 - Wiley Online Library
A single square centimetre of the human skin can contain up to one billion microorganisms.
These diverse communities of bacteria, fungi, mites and viruses can provide protection …
These diverse communities of bacteria, fungi, mites and viruses can provide protection …
[HTML][HTML] Emerging trends for microbiome analysis: from single-cell functional imaging to microbiome big data
Method development has always been and will continue to be a core driving force of
microbiome science. In this perspective, we argue that in the next decade, method …
microbiome science. In this perspective, we argue that in the next decade, method …
Parallel-META 2.0: enhanced metagenomic data analysis with functional annotation, high performance computing and advanced visualization
The metagenomic method directly sequences and analyses genome information from
microbial communities. The main computational tasks for metagenomic analyses include …
microbial communities. The main computational tasks for metagenomic analyses include …
Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
Metagenomics has enabled accessing the genetic repertoire of natural microbial
communities. Metagenome shotgun sequencing has become the method of choice for …
communities. Metagenome shotgun sequencing has become the method of choice for …
A graphical framework for model selection criteria and significance tests: refutation, confirmation and ecology
In this study, we use a novel graphical heuristic to compare the way four methods:
significance testing, two popular information‐theoretic approaches (AIC and BIC) and …
significance testing, two popular information‐theoretic approaches (AIC and BIC) and …
Meta-QC-Chain: comprehensive and fast quality control method for metagenomic data
Next-generation sequencing (NGS) technology has revolutionized and significantly
impacted metagenomic research. However, the NGS data usually contains sequencing …
impacted metagenomic research. However, the NGS data usually contains sequencing …
CoVennTree: a new method for the comparative analysis of large datasets
The visualization of massive datasets, such as those resulting from comparative
metatranscriptome analyses or the analysis of microbial population structures using …
metatranscriptome analyses or the analysis of microbial population structures using …
Rapid comparison and correlation analysis among massive number of microbial community samples based on MDV data model
The research in microbial communities would potentially impact a vast number of
applications in “bio”-related disciplines. Large-scale analyses became a clear trend in …
applications in “bio”-related disciplines. Large-scale analyses became a clear trend in …
Keanu: a novel visualization tool to explore biodiversity in metagenomes
A Thrash, M Arick, RA Barbato, RM Jones… - BMC …, 2019 - Springer
Background One of the main challenges when analyzing complex metagenomics data is the
fact that large amounts of information need to be presented in a comprehensive and easy-to …
fact that large amounts of information need to be presented in a comprehensive and easy-to …
Porcine JAB1 significantly enhances apoptosis induced by staurosporine
Abstract c-Jun activation domain-binding protein-1 (JAB1), also known as the subunit 5 of
the COP9 signalosome, is a multifunctional protein that regulates cell proliferation, apoptosis …
the COP9 signalosome, is a multifunctional protein that regulates cell proliferation, apoptosis …