Visualization of biomedical data

SI O'Donoghue, BF Baldi, SJ Clark… - Annual Review of …, 2018 - annualreviews.org
The rapid increase in volume and complexity of biomedical data requires changes in
research, communication, and clinical practices. This includes learning how to effectively …

Big data visualization and analytics: Future research challenges and emerging applications

G Andrienko, N Andrienko, SM Drucker… - BigVis 2020: Big data …, 2020 - inria.hal.science
In the context of data visualization and analytics, this report outlines some of the challenges
and emerging applications that arise in the Big Data era. In particularly, fourteen …

A survey on ML4VIS: Applying machine learning advances to data visualization

Q Wang, Z Chen, Y Wang, H Qu - IEEE transactions on …, 2021 - ieeexplore.ieee.org
Inspired by the great success of machine learning (ML), researchers have applied ML
techniques to visualizations to achieve a better design, development, and evaluation of …

[HTML][HTML] Exploring the limits of complexity: A survey of empirical studies on graph visualisation

V Yoghourdjian, D Archambault, S Diehl, T Dwyer… - Visual Informatics, 2018 - Elsevier
For decades, researchers in information visualisation and graph drawing have focused on
develo** techniques for the layout and display of very large and complex networks …

DeepDrawing: A Deep Learning Approach to Graph Drawing

Y Wang, Z **, Q Wang, W Cui, T Ma… - IEEE Transactions on …, 2019 - ieeexplore.ieee.org
Node-link diagrams are widely used to facilitate network explorations. However, when using
a graph drawing technique to visualize networks, users often need to tune different algorithm …

[HTML][HTML] New guidance for using t-SNE: Alternative defaults, hyperparameter selection automation, and comparative evaluation

R Gove, L Cadalzo, N Leiby, JM Singer, A Zaitzeff - Visual Informatics, 2022 - Elsevier
We present new guidelines for choosing hyperparameters for t-SNE and an evaluation
comparing these guidelines to current ones. These guidelines include a proposed …

A deep generative model for graph layout

OH Kwon, KL Ma - IEEE Transactions on visualization and …, 2019 - ieeexplore.ieee.org
Different layouts can characterize different aspects of the same graph. Finding a “good”
layout of a graph is thus an important task for graph visualization. In practice, users often …

Context-aware sampling of large networks via graph representation learning

Z Zhou, C Shi, X Shen, L Cai, H Wang… - … on Visualization and …, 2020 - ieeexplore.ieee.org
Numerous sampling strategies have been proposed to simplify large-scale networks for
highly readable visualizations. It is of great challenge to preserve contextual structures …

Calliope-net: Automatic generation of graph data facts via annotated node-link diagrams

Q Chen, N Chen, W Shuai, G Wu, Z Xu… - … on Visualization and …, 2023 - ieeexplore.ieee.org
Graph or network data are widely studied in both data mining and visualization communities
to review the relationship among different entities and groups. The data facts derived from …

DRGraph: An efficient graph layout algorithm for large-scale graphs by dimensionality reduction

M Zhu, W Chen, Y Hu, Y Hou, L Liu… - IEEE Transactions on …, 2020 - ieeexplore.ieee.org
Efficient layout of large-scale graphs remains a challenging problem: the force-directed and
dimensionality reduction-based methods suffer from high overhead for graph distance and …