Evolution of two-component signal transduction systems

EJ Capra, MT Laub - Annual review of microbiology, 2012 - annualreviews.org
To exist in a wide range of environmental niches, bacteria must sense and respond to a
variety of external signals. A primary means by which this occurs is through two-component …

Salmonella pathogenicity and host adaptation in chicken-associated serovars

SL Foley, TJ Johnson, SC Ricke, R Nayak… - Microbiology and …, 2013 - journals.asm.org
Enteric pathogens such as Salmonella enterica cause significant morbidity and mortality. S.
enterica serovars are a diverse group of pathogens that have evolved to survive in a wide …

Three problems in the genetics of speciation by selection

D Schluter, LH Rieseberg - Proceedings of the National Academy of …, 2022 - pnas.org
Speciation is the process by which barriers to gene flow evolve between populations.
Although we now know that speciation is largely driven by natural selection, knowledge of …

The energetics of genome complexity

N Lane, W Martin - Nature, 2010 - nature.com
All complex life is composed of eukaryotic (nucleated) cells. The eukaryotic cell arose from
prokaryotes just once in four billion years, and otherwise prokaryotes show no tendency to …

Pervasive domestication of defective prophages by bacteria

LM Bobay, M Touchon, EPC Rocha - … of the National Academy of Sciences, 2014 - pnas.org
Integrated phages (prophages) are major contributors to the diversity of bacterial gene
repertoires. Domestication of their components is thought to have endowed bacteria with …

Pseudofinder: detection of pseudogenes in prokaryotic genomes

MJ Syberg-Olsen, AI Garber, PJ Keeling… - Molecular Biology …, 2022 - academic.oup.com
Prokaryotic genomes are usually densely packed with intact and functional genes. However,
in certain contexts, such as after recent ecological shifts or extreme population bottlenecks …

[HTML][HTML] Comparative analysis of core genome MLST and SNP ty** within a European Salmonella serovar Enteritidis outbreak

ME Pearce, NF Alikhan, TJ Dallman, Z Zhou… - International journal of …, 2018 - Elsevier
Multi-country outbreaks of foodborne bacterial disease present challenges in their detection,
tracking, and notification. As food is increasingly distributed across borders, such outbreaks …

Pseudogenes: pseudo-functional or key regulators in health and disease?

RC Pink, K Wicks, DP Caley, EK Punch, L Jacobs… - Rna, 2011 - rnajournal.cshlp.org
Pseudogenes have long been labeled as “junk” DNA, failed copies of genes that arise
during the evolution of genomes. However, recent results are challenging this moniker; …

Dynamic Evolution of Pathogenicity Revealed by Sequencing and Comparative Genomics of 19 Pseudomonas syringae Isolates

DA Baltrus, MT Nishimura, A Romanchuk… - PLoS …, 2011 - journals.plos.org
Closely related pathogens may differ dramatically in host range, but the molecular, genetic,
and evolutionary basis for these differences remains unclear. In many Gram-negative …

Genomic transition of enterococci from gut commensals to leading causes of multidrug-resistant hospital infection in the antibiotic era

MS Gilmore, F Lebreton, W Van Schaik - Current opinion in microbiology, 2013 - Elsevier
The enterococci evolved over eons as highly adapted members of gastrointestinal consortia
of a wide variety of hosts, but for reasons that are not entirely clear, emerged in the 1970s as …