Genetics and genomics of moso bamboo (Phyllostachys edulis): Current status, future challenges, and biotechnological opportunities toward a sustainable bamboo …

M Ramakrishnan, K Yrjälä, KK Vinod… - Food and Energy …, 2020 - Wiley Online Library
Sustainable goals for contemporary world seek viable solutions for interconnected
challenges, particularly in the fields of food and energy security and climate change. We …

Analysis of transcriptome and epitranscriptome in plants using PacBio Iso-Seq and nanopore-based direct RNA sequencing

L Zhao, H Zhang, MV Kohnen, KVSK Prasad… - Frontiers in …, 2019 - frontiersin.org
Nanopore sequencing from Oxford Nanopore Technologies (ONT) and Pacific BioSciences
(PacBio) single-molecule real-time (SMRT) long-read isoform sequencing (Iso-Seq) are …

Micro pin fins with topologically optimized configurations enhance flow boiling heat transfer in manifold microchannel heat sinks

J Zhou, Q Li, X Chen - International Journal of Heat and Mass Transfer, 2023 - Elsevier
The manifold microchannel heat sink (MMCHS) is a promising design for heat dissipation in
high power electronics. However, the configuration of the microchannels in MMCHS is …

Advances and applications of single‐cell omics technologies in plant research

Y Mo, Y Jiao - The Plant Journal, 2022 - Wiley Online Library
Single‐cell sequencing approaches reveal the intracellular dynamics of individual cells and
answer biological questions with high‐dimensional catalogs of millions of cells, including …

Analysis and comprehensive comparison of PacBio and nanopore-based RNA sequencing of the Arabidopsis transcriptome

J Cui, N Shen, Z Lu, G Xu, Y Wang, B ** - Plant Methods, 2020 - Springer
Background The number of studies using third-generation sequencing utilising Pacific
Biosciences (PacBio) and Oxford Nanopore Technologies (ONT) is rapidly increasing in …

Developmental regulation of stolon and rhizome

L Guo, M Plunkert, X Luo, Z Liu - Current opinion in plant biology, 2021 - Elsevier
Highlights•Stolons and rhizomes are specialized stems for vegetative reproduction in many
plant species.•Stolons and rhizomes enhance survival as well as invasiveness.•Diploid wild …

Allele‐aware chromosome‐scale assembly of the allopolyploid genome of hexaploid Ma bamboo (Dendrocalamus latiflorus Munro)

Y Zheng, D Yang, J Rong, L Chen… - Journal of Integrative …, 2022 - Wiley Online Library
Dendrocalamus latiflorus Munro is a woody clum** bamboo with rapid shoot growth. Both
genetic transformation and clustered regularly interspaced short palindromic repeats …

New genes interacted with recent whole-genome duplicates in the fast stem growth of bamboos

G **, PF Ma, X Wu, L Gu, M Long… - Molecular biology and …, 2021 - academic.oup.com
As drivers of evolutionary innovations, new genes allow organisms to explore new niches.
However, clear examples of this process remain scarce. Bamboos, the unique grass lineage …

PacBio full‐length cDNA sequencing integrated with RNA‐seq reads drastically improves the discovery of splicing transcripts in rice

G Zhang, M Sun, J Wang, M Lei, C Li, D Zhao… - The Plant …, 2019 - Wiley Online Library
In eukaryotes, alternative splicing (AS) greatly expands the diversity of transcripts. However,
it is challenging to accurately determine full‐length splicing isoforms. Recently, more studies …

The developmental dynamics of the Populus stem transcriptome

Q Chao, ZF Gao, D Zhang, BG Zhao… - Plant biotechnology …, 2019 - Wiley Online Library
The Populus shoot undergoes primary growth (longitudinal growth) followed by secondary
growth (radial growth), which produces biomass that is an important source of energy …