The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota

JC Lagier, P Hugon, S Khelaifia… - Clinical microbiology …, 2015 - Am Soc Microbiol
Bacterial culture was the first method used to describe the human microbiota, but this
method is considered outdated by many researchers. Metagenomics studies have since …

Current and past strategies for bacterial culture in clinical microbiology

JC Lagier, S Edouard, I Pagnier… - Clinical microbiology …, 2015 - Am Soc Microbiol
SUMMARY A pure bacterial culture remains essential for the study of its virulence, its
antibiotic susceptibility, and its genome sequence in order to facilitate the understanding …

Transforming clinical microbiology with bacterial genome sequencing

X Didelot, R Bowden, DJ Wilson, TEA Peto… - Nature Reviews …, 2012 - nature.com
Whole-genome sequencing of bacteria has recently emerged as a cost-effective and
convenient approach for addressing many microbiological questions. Here, we review the …

Cutaneous mycobacterial infections

C Franco-Paredes, LA Marcos… - Clinical microbiology …, 2018 - Am Soc Microbiol
Humans encounter mycobacterial species due to their ubiquity in different environmental
niches. In many individuals, pathogenic mycobacterial species may breach our first-line …

[HTML][HTML] Host evasion and exploitation schemes of Mycobacterium tuberculosis

CJ Cambier, S Falkow, L Ramakrishnan - Cell, 2014 - cell.com
Tuberculosis, an ancient disease of mankind, remains one of the major infectious causes of
human death. We examine newly discovered facets of tuberculosis pathogenesis and …

[PDF][PDF] From clinical symptoms to diagnosis: A guide to identifying leprosy

I Karunarathna, S Rajapaksha, U Ekanayake… - 2024 - researchgate.net
Leprosy, or Hansen's disease, is a chronic granulomatous infection primarily caused by
Mycobacterium leprae and Mycobacterium lepromatosis. Despite its historical stigma and …

Leprosy now: epidemiology, progress, challenges, and research gaps

LC Rodrigues, DNJ Lockwood - The Lancet infectious diseases, 2011 - thelancet.com
Leprosy continues to be a challenge to health worldwide, with about 250 000 new cases
being detected every year. Despite widespread implementation of effective multidrug …

Twenty years of bacterial genome sequencing

NJ Loman, MJ Pallen - Nature Reviews Microbiology, 2015 - nature.com
Twenty years ago, the publication of the first bacterial genome sequence, from Haemophilus
influenzae, shook the world of bacteriology. In this Timeline, we review the first two decades …

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

CU Köser, MJ Ellington, EJP Cartwright, SH Gillespie… - 2012 - journals.plos.org
Whole genome sequencing (WGS) promises to be transformative for the practice of clinical
microbiology, and the rapidly falling cost and turnaround time mean that this will become a …

Reservoirs and transmission routes of leprosy; A systematic review

T Ploemacher, WR Faber, H Menke… - PLoS neglected …, 2020 - journals.plos.org
Leprosy is a chronic infectious disease caused by Mycobacterium leprae (M. leprae) and the
more recently discovered Mycobacterium lepromatosis (M. lepromatosis). The two leprosy …