Plant growth: the what, the how, and the why

J Hilty, B Muller, F Pantin, S Leuzinger - New Phytologist, 2021 - Wiley Online Library
Growth is a widely used term in plant science and ecology, but it can have different
meanings depending on the context and the spatiotemporal scale of analysis. At the …

Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning

NF Greenwald, G Miller, E Moen, A Kong, A Kagel… - Nature …, 2022 - nature.com
A principal challenge in the analysis of tissue imaging data is cell segmentation—the task of
identifying the precise boundary of every cell in an image. To address this problem we …

Geometry-informed neural operator for large-scale 3d pdes

Z Li, N Kovachki, C Choy, B Li… - Advances in …, 2023 - proceedings.neurips.cc
We propose the geometry-informed neural operator (GINO), a highly efficient approach for
learning the solution operator of large-scale partial differential equations with varying …

Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation

KJ Cutler, C Stringer, TW Lo, L Rappez, N Stroustrup… - Nature …, 2022 - nature.com
Advances in microscopy hold great promise for allowing quantitative and precise
measurement of morphological and molecular phenomena at the single-cell level in …

Segment anything for microscopy

A Archit, L Freckmann, S Nair, N Khalid, P Hilt… - Nature …, 2025 - nature.com
Accurate segmentation of objects in microscopy images remains a bottleneck for many
researchers despite the number of tools developed for this purpose. Here, we present …

[HTML][HTML] LABKIT: labeling and segmentation toolkit for big image data

M Arzt, J Deschamps, C Schmied, T Pietzsch… - Frontiers in computer …, 2022 - frontiersin.org
We present Labkit, a user-friendly Fiji plugin for the segmentation of microscopy image data.
It offers easy to use manual and automated image segmentation routines that can be rapidly …

Computer vision-based wood identification and its expansion and contribution potentials in wood science: A review

SW Hwang, J Sugiyama - Plant Methods, 2021 - Springer
The remarkable developments in computer vision and machine learning have changed the
methodologies of many scientific disciplines. They have also created a new research field in …

A framework for robotic excavation and dry stone construction using on-site materials

RL Johns, M Wermelinger, R Mascaro, D Jud… - Science Robotics, 2023 - science.org
Automated building processes that enable efficient in situ resource utilization can facilitate
construction in remote locations while simultaneously offering a carbon-reducing alternative …

Forward flow for novel view synthesis of dynamic scenes

X Guo, J Sun, Y Dai, G Chen, X Ye… - Proceedings of the …, 2023 - openaccess.thecvf.com
This paper proposes a neural radiance field (NeRF) approach for novel view synthesis of
dynamic scenes using forward war**. Existing methods often adopt a static NeRF to …

Multiplexed single-cell 3D spatial gene expression analysis in plant tissue using PHYTOMap

T Nobori, M Oliva, R Lister, JR Ecker - Nature Plants, 2023 - nature.com
Retrieving the complex responses of individual cells in the native three-dimensional tissue
context is crucial for a complete understanding of tissue functions. Here, we present …