[HTML][HTML] Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of …
Selective breeding has been successfully applied to improve profitability and sustainability
in numerous aquatic species. Recent developments of high throughput genoty** …
in numerous aquatic species. Recent developments of high throughput genoty** …
[HTML][HTML] Advancing fish breeding in aquaculture through genome functional annotation
Genomics is increasingly applied in breeding programmes for farmed fish and shellfish
species around the world. However, current applications do not include information on …
species around the world. However, current applications do not include information on …
Whole genome resequencing identifies local adaptation associated with environmental variation for redband trout
Aquatic ectotherms are predicted to harbour genomic signals of local adaptation resulting
from selective pressures driven by the strong influence of climate conditions on body …
from selective pressures driven by the strong influence of climate conditions on body …
PacBio Iso-Seq improves the rainbow trout genome annotation and identifies alternative splicing associated with economically important phenotypes
Rainbow trout is an important model organism that has received concerted international
efforts to study the transcriptome. For this purpose, short-read sequencing has been …
efforts to study the transcriptome. For this purpose, short-read sequencing has been …
Accurate genotype imputation from low-coverage whole-genome sequencing data of rainbow trout
S Liu, KE Martin, WM Snelling, R Long… - G3: Genes …, 2024 - academic.oup.com
With the rapid and significant cost reduction of next-generation sequencing, low-coverage
whole-genome sequencing (lcWGS), followed by genotype imputation, is becoming a cost …
whole-genome sequencing (lcWGS), followed by genotype imputation, is becoming a cost …
Genome-wide association study and genomic prediction of tolerance to acute hypoxia in rainbow trout
M Prchal, J D'Ambrosio, H Lagarde, D Lallias, P Patrice… - Aquaculture, 2023 - Elsevier
Hypoxia is one of the major threats to the aquaculture sector resulting in substantial
economic losses to the fish farmers. Thus, tolerance to hypoxia is of high economic interest …
economic losses to the fish farmers. Thus, tolerance to hypoxia is of high economic interest …
Application of second-generation sequencing (SGS) and third generation sequencing (TGS) in aquaculture breeding program
High-throughput sequencing technologies have expanded gene-based to genome-wide
research in aquaculture species. Several techniques adopting the Second Generation …
research in aquaculture species. Several techniques adopting the Second Generation …
A homology guide for Pacific salmon genus Oncorhynchus resolves patterns of ohnolog retention, resolution and local adaptation following the salmonid‐specific …
Salmonid fishes have emerged as a tractable model to study whole‐genome duplications
(WGDs) as this group has undergone four rounds of WGDs. While most of the salmonid …
(WGDs) as this group has undergone four rounds of WGDs. While most of the salmonid …
The pink salmon genome: Uncovering the genomic consequences of a two-year life cycle
Pink salmon (Oncorhynchus gorbuscha) adults are the smallest of the five Pacific salmon
native to the western Pacific Ocean. Pink salmon are also the most abundant of these …
native to the western Pacific Ocean. Pink salmon are also the most abundant of these …
Genetic architecture of acute hyperthermia resistance in juvenile rainbow trout (Oncorhynchusmykiss) and genetic correlations with production traits
H Lagarde, D Lallias, P Patrice, A Dehaullon… - Genetics Selection …, 2023 - Springer
Background Selective breeding is a promising solution to reduce the vulnerability of fish
farms to heat waves, which are predicted to increase in intensity and frequency. However …
farms to heat waves, which are predicted to increase in intensity and frequency. However …