Non-adiabatic excited-state molecular dynamics: Theory and applications for modeling photophysics in extended molecular materials

TR Nelson, AJ White, JA Bjorgaard, AE Sifain… - Chemical …, 2020 - ACS Publications
Optically active molecular materials, such as organic conjugated polymers and biological
systems, are characterized by strong coupling between electronic and vibrational degrees of …

Silica surface features and their role in the adsorption of biomolecules: computational modeling and experiments

A Rimola, D Costa, M Sodupe, JF Lambert… - Chemical …, 2013 - ACS Publications
There are many reasons to report on silica interacting with biomolecules. The most obvious
one is that on the Earth's crust, oxygen and silicon are the most abundant atomic species …

[HTML][HTML] DFTB+, a software package for efficient approximate density functional theory based atomistic simulations

B Hourahine, B Aradi, V Blum, F Bonafe… - The Journal of …, 2020 - pubs.aip.org
DFTB+ is a versatile community developed open source software package offering fast and
efficient methods for carrying out atomistic quantum mechanical simulations. By …

Atomic cluster expansion for quantum-accurate large-scale simulations of carbon

M Qamar, M Mrovec, Y Lysogorskiy… - Journal of Chemical …, 2023 - ACS Publications
We present an atomic cluster expansion (ACE) for carbon that improves over available
classical and machine learning potentials. The ACE is parametrized from an exhaustive set …

DFTB3: Extension of the self-consistent-charge density-functional tight-binding method (SCC-DFTB)

M Gaus, Q Cui, M Elstner - Journal of chemical theory and …, 2011 - ACS Publications
The self-consistent-charge density-functional tight-binding method (SCC-DFTB) is an
approximate quantum chemical method derived from density functional theory (DFT) based …

Progress in time-dependent density-functional theory

ME Casida, M Huix-Rotllant - Annual review of physical …, 2012 - annualreviews.org
The classic density-functional theory (DFT) formalism introduced by Hohenberg, Kohn, and
Sham in the mid-1960s is based on the idea that the complicated N-electron wave function …

Representing potential energy surfaces by high-dimensional neural network potentials

J Behler - Journal of Physics: Condensed Matter, 2014 - iopscience.iop.org
The development of interatomic potentials employing artificial neural networks has seen
tremendous progress in recent years. While until recently the applicability of neural network …

DFTB+, a sparse matrix-based implementation of the DFTB method

B Aradi, B Hourahine, T Frauenheim - The Journal of Physical …, 2007 - ACS Publications
A new Fortran 95 implementation of the DFTB (density functional-based tight binding)
method has been developed, where the sparsity of the DFTB system of equations has been …

Theoretical assessment of the solvent effect on the functionalization of Au32 and C60 nanocages with fluorouracil drug

M Sabet, S Tanreh, A Khosravi, M Astaraki… - Diamond and Related …, 2022 - Elsevier
We studied the interaction of 5-Fluorouracil (5-FU) with Au 32 and C 60 fullerene nanocage
by Density Functional Theory (DFT). From its different active sites, 5-FU was approached to …

Density-functional tight-binding for beginners

P Koskinen, V Mäkinen - Computational Materials Science, 2009 - Elsevier
This article is a pedagogical introduction to density-functional tight-binding (DFTB) method.
We derive it from the density-functional theory, give the details behind the tight-binding …