TET-mediated active DNA demethylation: mechanism, function and beyond

X Wu, Y Zhang - Nature Reviews Genetics, 2017 - nature.com
In mammals, DNA methylation in the form of 5-methylcytosine (5mC) can be actively
reversed to unmodified cytosine (C) through TET dioxygenase-mediated oxidation of 5mC to …

Epigenetics of modified DNA bases: 5-methylcytosine and beyond

S Kumar, V Chinnusamy, T Mohapatra - Frontiers in genetics, 2018 - frontiersin.org
Modification of DNA bases plays vital roles in the epigenetic control of gene expression in
both animals and plants. Though much attention is given to the conventional epigenetic …

Reprogramming to recover youthful epigenetic information and restore vision

Y Lu, B Brommer, X Tian, A Krishnan, M Meer, C Wang… - Nature, 2020 - nature.com
Ageing is a degenerative process that leads to tissue dysfunction and death. A proposed
cause of ageing is the accumulation of epigenetic noise that disrupts gene expression …

Age-related clonal hematopoiesis associated with adverse outcomes

S Jaiswal, P Fontanillas, J Flannick… - … England Journal of …, 2014 - Mass Medical Soc
Background The incidence of hematologic cancers increases with age. These cancers are
associated with recurrent somatic mutations in specific genes. We hypothesized that such …

YAP induces an oncogenic transcriptional program through TET1-mediated epigenetic remodeling in liver growth and tumorigenesis

BK Wu, SC Mei, EH Chen, Y Zheng, D Pan - Nature genetics, 2022 - nature.com
Epigenetic remodeling is essential for oncogene-induced cellular transformation and
malignancy. In contrast to histone post-translational modifications, how DNA methylation is …

TET enzymes, TDG and the dynamics of DNA demethylation

RM Kohli, Y Zhang - Nature, 2013 - nature.com
DNA methylation has a profound impact on genome stability, transcription and development.
Although enzymes that catalyse DNA methylation have been well characterized, those that …

[HTML][HTML] Biological role and therapeutic potential of IDH mutations in cancer

MS Waitkus, BH Diplas, H Yan - Cancer cell, 2018 - cell.com
Hotspot mutations in isocitrate dehydrogenase 1 (IDH1) and isocitrate dehydrogenase 2
(IDH2) occur in a variety of myeloid malignancies and solid tumors. Mutant IDH proteins …

[HTML][HTML] Reversing DNA methylation: mechanisms, genomics, and biological functions

H Wu, Y Zhang - Cell, 2014 - cell.com
Methylation of cytosines in the mammalian genome represents a key epigenetic modification
and is dynamically regulated during development. Compelling evidence now suggests that …

Interplay between metabolism and epigenetics: a nuclear adaptation to environmental changes

JP Etchegaray, R Mostoslavsky - Molecular cell, 2016 - cell.com
The physiological identity of every cell is maintained by highly specific transcriptional
networks that establish a coherent molecular program that is in tune with nutritional …

5-Hydroxymethylcytosine signatures in circulating cell-free DNA as diagnostic biomarkers for human cancers

W Li, X Zhang, X Lu, L You, Y Song, Z Luo, J Zhang… - Cell research, 2017 - nature.com
DNA modifications such as 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)
are epigenetic marks known to affect global gene expression in mammals. Given their …