[HTML][HTML] Centennial Review: Factors affecting the chicken gastrointestinal microbial composition and their association with gut health and productive performance

YR Bindari, PF Gerber - Poultry Science, 2022 - Elsevier
Maintenance of “gut health” is considered a priority in commercial chicken farms, although a
precise definition of what constitutes gut health and how to evaluate it is still lacking. In …

Impact of DNA extraction method and targeted 16S-rRNA hypervariable region on oral microbiota profiling

F Teng, SS Darveekaran Nair, P Zhu, S Li, S Huang… - Scientific reports, 2018 - nature.com
Amplification and sequencing of 16S amplicons are widely used for profiling the structure of
oral microbiota. However, it remains not clear whether and to what degree DNA extraction …

Unraveling the plastic degradation potentials of the plastisphere-associated marine bacterial consortium as a key player for the low-density polyethylene degradation

G Joshi, P Goswami, P Verma, G Prakash… - Journal of hazardous …, 2022 - Elsevier
The omnipresent accumulation and non-degradable nature of plastics in the environment
are posing an ever-increasing ecological threat. In this study, a total of 97 bacteria were …

Impact of bead-beating intensity on the genus-and species-level characterization of the gut microbiome using amplicon and complete 16S rRNA gene sequencing

B Zhang, M Brock, C Arana, C Dende… - Frontiers in cellular …, 2021 - frontiersin.org
Bead-beating within a DNA extraction protocol is critical for complete microbial cell lysis and
accurate assessment of the abundance and composition of the microbiome. While the …

Evaluation of novel multiplex qPCR assays for diagnosis of pathogens associated with the bovine respiratory disease complex

P Pansri, J Katholm, KM Krogh, AK Aagaard… - The Veterinary …, 2020 - Elsevier
Bovine respiratory disease complex is the most common disease requiring the use of
antimicrobials in industrial calf production worldwide. Pathogenic bacteria (Mannheimia …

Gauging the skin resident Leishmania parasites through a loop mediated isothermal amplification (LAMP) assay in post-kala-azar dermal leishmaniasis

P Ghosh, R Chowdhury, S Maruf, A Picado… - Scientific Reports, 2022 - nature.com
Despite the availability of highly sensitive polymerase chain reaction (PCR)-based methods,
the dearth of remotely deployable diagnostic tools circumvents the early and accurate …

[HTML][HTML] Comparative analysis of virulence determinants, phylogroups, and antibiotic susceptibility patterns of typical versus atypical Enteroaggregative E. coli in India

V Modgil, J Mahindroo, C Narayan… - PLoS neglected …, 2020 - journals.plos.org
Enteroaggregative Escherichia coli (EAEC) is an evolving enteric pathogen that causes
acute and chronic diarrhea in developed and industrialized nations in children. EAEC …

Molecular Epidemiology of mcr-1, blaKPC-2, and blaNDM-1 Harboring Clinically Isolated Escherichia coli from Pakistan

H Bilal, TU Rehman, MA Khan, F Hameed… - Infection and Drug …, 2021 - Taylor & Francis
Purpose The multiple-drug resistant Escherichia coli are among the deadliest pathogens
causing life-threatening infections. This study was planned to determine the molecular …

The Link between occurrence of class I integron and acquired aminoglycoside resistance in clinical MRSA isolates

AM El-Baz, G Yahya, B Mansour, MMA El-Sokkary… - Antibiotics, 2021 - mdpi.com
Methicillin-resistant Staphylococcus aureus (MRSA) is a major cause of nosocomial
infections because of its high resistance. Here, we study the antibiotic resistance in MRSA …

The human microbiota and obesity: A literature systematic review of in vivo models and technical approaches

L Carrera-Quintanar, D Ortuño-Sahagún… - International journal of …, 2018 - mdpi.com
Obesity is a noncommunicable disease that affects a considerable part of humanity.
Recently, it has been recognized that gut microbiota constitutes a fundamental factor in the …