Designing future crops: genomics-assisted breeding comes of age

RK Varshney, A Bohra, J Yu, A Graner, Q Zhang… - Trends in Plant …, 2021 - cell.com
Over the past decade, genomics-assisted breeding (GAB) has been instrumental in
harnessing the potential of modern genome resources and characterizing and exploiting …

Peroxiredoxins and redox signaling in plants

M Liebthal, D Maynard, KJ Dietz - Antioxidants & redox signaling, 2018 - liebertpub.com
Abstract Significance: Peroxiredoxins (Prxs) are thiol peroxidases with multiple functions in
the antioxidant defense and redox signaling network of the cell. Our progressing …

RiceXPro version 3.0: expanding the informatics resource for rice transcriptome

Y Sato, H Takehisa, K Kamatsuki, H Minami… - Nucleic acids …, 2013 - academic.oup.com
A wide range of resources on gene expression profiling enhance various strategies in plant
molecular biology particularly in characterization of gene function. We have updated our …

The significance and functions of ethylene in flooding stress tolerance in plants

MIR Khan, A Trivellini, H Chhillar, P Chopra… - Environmental and …, 2020 - Elsevier
Climate change has increased the global environmental risks, especially the impacts of
abiotic stresses on agriculture productivity. Among the abiotic stresses aggravated by …

Rice Expression Database (RED): An integrated RNA-Seq-derived gene expression database for rice

L **a, D Zou, J Sang, X Xu, H Yin, M Li, S Wu… - Journal of Genetics and …, 2017 - Elsevier
Rice is one of the most important stable food as well as a monocotyledonous model
organism for the plant research community. Here, we present RED (Rice Expression …

High performance of photosynthesis and osmotic adjustment are associated with salt tolerance ability in rice carrying drought tolerance QTL: physiological and co …

N Nounjan, P Chansongkrow… - Frontiers in plant …, 2018 - frontiersin.org
Understanding specific biological processes involving in salt tolerance mechanisms is
important for improving traits conferring tolerance to salinity, one of the most important …

Comparative transcriptome sequencing of tolerant rice introgression line and its parents in response to drought stress

L Huang, F Zhang, F Zhang, W Wang, Y Zhou, B Fu… - BMC genomics, 2014 - Springer
Abstract Background Rice (Oryza sativa. L) is more sensitive to drought stress than other
cereals, and large genotypic variation in drought tolerance (DT) exists within the cultivated …

Global analysis reveals the crucial roles of DNA methylation during rice seed development

MQ **ng, YJ Zhang, SR Zhou, WY Hu, XT Wu… - Plant …, 2015 - academic.oup.com
Seed development is an important process of reproductive development and consists of
embryo and endosperm development; both comprise several key processes. To determine …

Dynamic changes of small RNAs in rice spikelet development reveal specialized reproductive phasiRNA pathways

Q Fei, L Yang, W Liang, D Zhang… - Journal of Experimental …, 2016 - academic.oup.com
Dissection of the genetic pathways and mechanisms by which anther development occurs in
grasses is crucial for both a basic understanding of plant development and for examining …

RiceFREND: a platform for retrieving coexpressed gene networks in rice

Y Sato, N Namiki, H Takehisa, K Kamatsuki… - Nucleic acids …, 2013 - academic.oup.com
Similarity of gene expression across a wide range of biological conditions can be efficiently
used in characterization of gene function. We have constructed a rice gene coexpression …