Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

PG Arnison, MJ Bibb, G Bierbaum, AA Bowers… - Natural product …, 2013 - pubs.rsc.org
Covering: 1988 to 2012 This review presents recommended nomenclature for the
biosynthesis of ribosomally synthesized and post-translationally modified peptides (RiPPs) …

New insights into the biosynthetic logic of ribosomally synthesized and post-translationally modified peptide natural products

MA Ortega, WA Van Der Donk - Cell chemical biology, 2016 - cell.com
Ribosomally synthesized and post-translationally modified peptides (RiPPs) are a large
group of structurally diverse natural products. Their biological activities and unique …

Butelase 1 is an Asx-specific ligase enabling peptide macrocyclization and synthesis

GKT Nguyen, S Wang, Y Qiu, X Hemu, Y Lian… - Nature chemical …, 2014 - nature.com
Proteases are ubiquitous in nature, whereas naturally occurring peptide ligases, enzymes
catalyzing the reverse reactions of proteases, are rare occurrences. Here we describe the …

Nature-inspired protein ligation and its applications

R Pihl, Q Zheng, Y David - Nature Reviews Chemistry, 2023 - nature.com
The ability to manipulate the chemical composition of proteins and peptides has been
central to the development of improved polypeptide-based therapeutics and has enabled …

Efficient backbone cyclization of linear peptides by a recombinant asparaginyl endopeptidase

KS Harris, T Durek, Q Kaas, AG Poth, EK Gilding… - Nature …, 2015 - nature.com
Cyclotides are diverse plant backbone cyclized peptides that have attracted interest as
pharmaceutical scaffolds, but fundamentals of their biosynthetic origin remain elusive …

YcaO-dependent posttranslational amide activation: biosynthesis, structure, and function

BJ Burkhart, CJ Schwalen, G Mann, JH Naismith… - Chemical …, 2017 - ACS Publications
With advances in sequencing technology, uncharacterized proteins and domains of
unknown function (DUFs) are rapidly accumulating in sequence databases and offer an …

[HTML][HTML] Genome mining strategies for ribosomally synthesised and post-translationally modified peptides

AH Russell, AW Truman - Computational and structural biotechnology …, 2020 - Elsevier
Genome mining is a computational method for the automatic detection and annotation of
biosynthetic gene clusters (BGCs) from genomic data. This approach has been increasingly …

Selection-based discovery of druglike macrocyclic peptides

T Passioura, T Katoh, Y Goto… - Annual review of …, 2014 - annualreviews.org
Macrocyclic peptides are an emerging class of therapeutics that can modulate protein–
protein interactions. In contrast to the heavily automated high-throughput screening systems …

[PDF][PDF] Engineering lanthipeptides by introducing a large variety of RiPP modifications to obtain new-to-nature bioactive peptides

Y Fu, Y Xu, F Ruijne, OP Kuipers - FEMS Microbiology Reviews, 2023 - academic.oup.com
Natural bioactive peptide discovery is a challenging and time-consuming process. However,
advances in synthetic biology are providing promising new avenues in peptide engineering …

Subtiligase-catalyzed peptide ligation

AM Weeks, JA Wells - Chemical reviews, 2019 - ACS Publications
Subtiligase-catalyzed peptide ligation is a powerful approach for site-specific protein
bioconjugation, synthesis and semisynthesis of proteins and peptides, and chemoproteomic …