Light, matter, action: Shining light on active matter

M Rey, G Volpe, G Volpe - ACS photonics, 2023 - ACS Publications
Light carries energy and momentum. It can therefore alter the motion of objects on the
atomic to astronomical scales. Being widely available, readily controllable, and broadly …

[HTML][HTML] Novel tools to study cell-ECM interactions, cell adhesion dynamics and migration

M Dibus, O Joshi, J Ivaska - Current Opinion in Cell Biology, 2024 - Elsevier
Integrin-mediated cell adhesion is essential for cell migration, mechanotransduction and
tissue integrity. In vivo, these processes are regulated by complex physicochemical signals …

Image processing tools for petabyte-scale light sheet microscopy data

X Ruan, M Mueller, G Liu, F Görlitz, TM Fu, DE Milkie… - Nature …, 2024 - nature.com
Light sheet microscopy is a powerful technique for high-speed three-dimensional imaging of
subcellular dynamics and large biological specimens. However, it often generates datasets …

Fluorescence Microscopy: a statistics-optics perspective

M Fazel, KS Grussmayer, B Ferdman, A Radenovic… - Reviews of Modern …, 2024 - APS
Fundamental properties of light unavoidably impose features on images collected using
fluorescence microscopes. Accounting for these features is often critical in quantitatively …

Local conditional neural fields for versatile and generalizable large-scale reconstructions in computational imaging

H Wang, J Zhu, Y Li, QW Yang, L Tian - arxiv preprint arxiv:2307.06207, 2023 - arxiv.org
Deep learning has transformed computational imaging, but traditional pixel-based
representations limit their ability to capture continuous, multiscale details of objects. Here we …

Learned, uncertainty-driven adaptive acquisition for photon-efficient multiphoton microscopy

CT Ye, J Han, K Liu, A Angelopoulos, L Griffith… - arxiv preprint arxiv …, 2023 - arxiv.org
Multiphoton microscopy (MPM) is a powerful imaging tool that has been a critical enabler for
live tissue imaging. However, since most multiphoton microscopy platforms rely on point …

Roadmap on machine learning glassy dynamics

G Jung, RM Alkemade, V Bapst, D Coslovich… - Nature Reviews …, 2025 - nature.com
Unravelling the connections between microscopic structure, emergent physical properties
and slow dynamics has long been a challenge when studying the glass transition. The …

Scientific exploration with expert knowledge (SEEK) in autonomous scanning probe microscopy with active learning

U Pratiush, H Funakubo, R Vasudevan, SV Kalinin… - Digital …, 2025 - pubs.rsc.org
Microscopy plays a foundational role in materials science, biology, and nanotechnology,
offering high-resolution imaging and detailed insights into properties at the nanoscale and …

AI analysis of super-resolution microscopy: Biological discovery in the absence of ground truth

IR Nabi, B Cardoen, IM Khater, G Gao, TH Wong… - Journal of Cell …, 2024 - rupress.org
Super-resolution microscopy, or nanoscopy, enables the use of fluorescent-based molecular
localization tools to study molecular structure at the nanoscale level in the intact cell …

[HTML][HTML] Generic arrays of surface-positioned and shallow-buried gold multi-shapes as reference samples to benchmark near-field microscopes. Part 1: Applications in …

B Kusnetz, J Belhassen, DE Tranca, SG Stanciu… - Results in Physics, 2024 - Elsevier
A wide palette of nanoscale imaging techniques operating in the near-field regime has been
reported to date, enabling an important number of scientific breakthroughs. While the tuning …