DNA as a universal chemical substrate for computing and data storage

S Yang, BWA Bögels, F Wang, C Xu, H Dou… - Nature Reviews …, 2024 - nature.com
DNA computing and DNA data storage are emerging fields that are unlocking new
possibilities in information technology and diagnostics. These approaches use DNA …

Efficient data reconstruction: The bottleneck of large-scale application of DNA storage

B Cao, Y Zheng, Q Shao, Z Liu, L **e, Y Zhao, B Wang… - Cell Reports, 2024 - cell.com
Over the past decade, the rapid development of DNA synthesis and sequencing
technologies has enabled preliminary use of DNA molecules for digital data storage …

Composite Hedges Nanopores codec system for rapid and portable DNA data readout with high INDEL-Correction

X Zhao, J Li, Q Fan, J Dai, Y Long, R Liu, J Zhai… - Nature …, 2024 - nature.com
Reading digital information from highly dense but lightweight DNA medium nowadays relies
on time-consuming next-generation sequencing. Nanopore sequencing holds the promise …

A digital twin for DNA data storage based on comprehensive quantification of errors and biases

AL Gimpel, WJ Stark, R Heckel, RN Grass - Nature Communications, 2023 - nature.com
Archiving data in synthetic DNA offers unprecedented storage density and longevity.
Handling and storage introduce errors and biases into DNA-based storage systems …

DNA-QLC: an efficient and reliable image encoding scheme for DNA storage

Y Zheng, B Cao, X Zhang, S Cui, B Wang, Q Zhang - BMC genomics, 2024 - Springer
Background DNA storage has the advantages of large capacity, long-term stability, and low
power consumption relative to other storage mediums, making it a promising new storage …

Limit and screen sequences with high degree of secondary structures in DNA storage by deep learning method

W Lin, L Chu, Y Su, R **e, X Yao, X Zan, P Xu… - Computers in Biology …, 2023 - Elsevier
Abstract Background In single-stranded DNAs/RNAs, secondary structures are very common
especially in long sequences. It has been recognized that the high degree of secondary …

[HTML][HTML] BO-DNA: Biologically optimized encoding model for a highly-reliable DNA data storage

A Rasool, J Hong, Q Jiang, H Chen, Q Qu - Computers in Biology and …, 2023 - Elsevier
DNA data storage is a promising technology that utilizes computer simulation, and synthetic
biology, offering high-density and reliable digital information storage. It is challenging to …

Explorer: efficient DNA coding by De Bruijn graph toward arbitrary local and global biochemical constraints

C Dou, Y Yang, F Zhu, BZ Li… - Briefings in …, 2024 - academic.oup.com
With the exponential growth of digital data, there is a pressing need for innovative storage
media and techniques. DNA molecules, due to their stability, storage capacity, and density …

PELMI: Realize robust DNA image storage under general errors via parity encoding and local mean iteration

B Cao, K Wang, L **e, J Zhang, Y Zhao… - Briefings in …, 2024 - academic.oup.com
DNA molecules as storage media are characterized by high encoding density and low
energy consumption, making DNA storage a highly promising storage method. However …

An Effective DNA‐Based File Storage System for Practical Archiving and Retrieval of Medical MRI Data

A Rasool, J Hong, Z Hong, Y Li, C Zou, H Chen… - Small …, 2024 - Wiley Online Library
DNA‐based data storage is a new technology in computational and synthetic biology, that
offers a solution for long‐term, high‐density data archiving. Given the critical importance of …