Expansion of microbial forensics

SE Schmedes, A Sajantila… - Journal of clinical …, 2016 - journals.asm.org
Microbial forensics has been defined as the discipline of applying scientific methods to the
analysis of evidence related to bioterrorism, biocrimes, hoaxes, or the accidental release of …

Metagenomic analysis of chicken gut microbiota for improving metabolism and health of chickens—a review

KY Choi, TK Lee, WJ Sul - Asian-Australasian journal of …, 2015 - pmc.ncbi.nlm.nih.gov
Chicken is a major food source for humans, hence it is important to understand the
mechanisms involved in nutrient absorption in chicken. In the gastrointestinal tract (GIT), the …

[HTML][HTML] Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota

A Van Deynze, P Zamora, PM Delaux, C Heitmann… - PLoS …, 2018 - journals.plos.org
Plants are associated with a complex microbiota that contributes to nutrient acquisition, plant
growth, and plant defense. Nitrogen-fixing microbial associations are efficient and well …

A taxonomy of bacterial microcompartment loci constructed by a novel scoring method

SD Axen, O Erbilgin, CA Kerfeld - PLoS computational biology, 2014 - journals.plos.org
Bacterial microcompartments (BMCs) are proteinaceous organelles involved in both
autotrophic and heterotrophic metabolism. All BMCs share homologous shell proteins but …

Gut microbiome differences between wild and captive black rhinoceros–implications for rhino health

KM Gibson, BN Nguyen, LM Neumann, M Miller… - Scientific Reports, 2019 - nature.com
A number of recent studies have shown the importance of the mammalian gut microbiome in
host health. In the context of endangered species, a few studies have examined the …

Genome-Enabled Insights into the Ecophysiology of the Comammox Bacterium “Candidatus Nitrospira nitrosa”

PY Camejo, J Santo Domingo, KD McMahon… - Msystems, 2017 - journals.asm.org
The recently discovered comammox bacteria have the potential to completely oxidize
ammonia to nitrate. These microorganisms are part of the Nitrospira genus and are present …

Urban wildlife crisis: Australian silver gull is a bystander host to widespread clinical antibiotic resistance

ER Wyrsch, K Nesporova, H Tarabai, I Jamborova… - Msystems, 2022 - journals.asm.org
The Australian silver gull is an urban-adapted species that frequents anthropogenic waste
sites. The enterobacterial flora of synanthropic birds often carries antibiotic resistance …

Metatranscriptomic and thermodynamic insights into medium-chain fatty acid production using an anaerobic microbiome

MJ Scarborough, CE Lawson, JJ Hamilton… - …, 2018 - journals.asm.org
Biomanufacturing from renewable feedstocks can offset fossil fuel-based chemical
production. One potential biomanufacturing strategy is production of medium-chain fatty …

Global distribution patterns and pangenomic diversity of the candidate phylum “Latescibacteria”(WS3)

IF Farag, NH Youssef, MS Elshahed - Applied and Environmental …, 2017 - journals.asm.org
We investigated the global distribution patterns and pangenomic diversity of the candidate
phylum “Latescibacteria”(WS3) in 16S rRNA gene as well as metagenomic data sets. We …

Gut microbiota interspecies interactions shape the response of Clostridioides difficile to clinically relevant antibiotics

S Hromada, OS Venturelli - Plos Biology, 2023 - journals.plos.org
In the human gut, the growth of the pathogen Clostridioides difficile is impacted by a
complex web of interspecies interactions with members of human gut microbiota. We …