Vision mamba: A comprehensive survey and taxonomy

X Liu, C Zhang, L Zhang - arxiv preprint arxiv:2405.04404, 2024 - arxiv.org
State Space Model (SSM) is a mathematical model used to describe and analyze the
behavior of dynamic systems. This model has witnessed numerous applications in several …

Segment anything in medical images

J Ma, Y He, F Li, L Han, C You, B Wang - Nature Communications, 2024 - nature.com
Medical image segmentation is a critical component in clinical practice, facilitating accurate
diagnosis, treatment planning, and disease monitoring. However, existing methods, often …

U-mamba: Enhancing long-range dependency for biomedical image segmentation

J Ma, F Li, B Wang - arxiv preprint arxiv:2401.04722, 2024 - arxiv.org
Convolutional Neural Networks (CNNs) and Transformers have been the most popular
architectures for biomedical image segmentation, but both of them have limited ability to …

Segment anything model for medical images?

Y Huang, X Yang, L Liu, H Zhou, A Chang, X Zhou… - Medical Image …, 2024 - Elsevier
Abstract The Segment Anything Model (SAM) is the first foundation model for general image
segmentation. It has achieved impressive results on various natural image segmentation …

Swin-umamba: Mamba-based unet with imagenet-based pretraining

J Liu, H Yang, HY Zhou, Y **, L Yu, C Li… - … Conference on Medical …, 2024 - Springer
Accurate medical image segmentation demands the integration of multi-scale information,
spanning from local features to global dependencies. However, it is challenging for existing …

Cellpose3: one-click image restoration for improved cellular segmentation

C Stringer, M Pachitariu - Nature Methods, 2025 - nature.com
Generalist methods for cellular segmentation have good out-of-the-box performance on a
variety of image types; however, existing methods struggle for images that are degraded by …

Segment anything for microscopy

A Archit, L Freckmann, S Nair, N Khalid, P Hilt… - Nature …, 2025 - nature.com
Accurate segmentation of objects in microscopy images remains a bottleneck for many
researchers despite the number of tools developed for this purpose. Here, we present …

Segment anything in medical images and videos: Benchmark and deployment

J Ma, S Kim, F Li, M Baharoon, R Asakereh… - arxiv preprint arxiv …, 2024 - arxiv.org
Recent advances in segmentation foundation models have enabled accurate and efficient
segmentation across a wide range of natural images and videos, but their utility to medical …

Computational methods and biomarker discovery strategies for spatial proteomics: a review in immuno-oncology

H Mi, S Sivagnanam, WJ Ho, S Zhang… - Briefings in …, 2024 - academic.oup.com
Advancements in imaging technologies have revolutionized our ability to deeply profile
pathological tissue architectures, generating large volumes of imaging data with …

Mmedagent: Learning to use medical tools with multi-modal agent

B Li, T Yan, Y Pan, J Luo, R Ji, J Ding, Z Xu… - arxiv preprint arxiv …, 2024 - arxiv.org
Multi-Modal Large Language Models (MLLMs), despite being successful, exhibit limited
generality and often fall short when compared to specialized models. Recently, LLM-based …