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HLA imputation and its application to genetic and molecular fine-map** of the MHC region in autoimmune diseases
Variations of human leukocyte antigen (HLA) genes in the major histocompatibility complex
region (MHC) significantly affect the risk of various diseases, especially autoimmune …
region (MHC) significantly affect the risk of various diseases, especially autoimmune …
Genomic landscape of cancer in racially and ethnically diverse populations
Cancer incidence and mortality rates can vary widely among different racial and ethnic
groups, attributed to a complex interplay of genetic, environmental and social factors …
groups, attributed to a complex interplay of genetic, environmental and social factors …
A comparison of genoty** arrays
JAM Verlouw, E Clemens, JH de Vries, O Zolk… - European Journal of …, 2021 - nature.com
Array technology to genotype single-nucleotide variants (SNVs) is widely used in genome-
wide association studies (GWAS), clinical diagnostics, and linkage studies. Arrays have …
wide association studies (GWAS), clinical diagnostics, and linkage studies. Arrays have …
Genetic determinants of risk in pulmonary arterial hypertension: international genome-wide association studies and meta-analysis
CJ Rhodes, K Batai, M Bleda, M Haimel… - The Lancet …, 2019 - thelancet.com
Background Rare genetic variants cause pulmonary arterial hypertension, but the
contribution of common genetic variation to disease risk and natural history is poorly …
contribution of common genetic variation to disease risk and natural history is poorly …
Rapid genotype imputation from sequence with reference panels
Inexpensive genoty** methods are essential to modern genomics. Here we present
QUILT, which performs diploid genotype imputation using low-coverage whole-genome …
QUILT, which performs diploid genotype imputation using low-coverage whole-genome …
HLA-A* 32: 01 is strongly associated with vancomycin-induced drug reaction with eosinophilia and systemic symptoms
Background Vancomycin is a prevalent cause of the severe hypersensitivity syndrome drug
reaction with eosinophilia and systemic symptoms (DRESS), which leads to significant …
reaction with eosinophilia and systemic symptoms (DRESS), which leads to significant …
A deep learning method for HLA imputation and trans-ethnic MHC fine-map** of type 1 diabetes
Conventional human leukocyte antigen (HLA) imputation methods drop their performance
for infrequent alleles, which is one of the factors that reduce the reliability of trans-ethnic …
for infrequent alleles, which is one of the factors that reduce the reliability of trans-ethnic …
Contribution of non-HLA incompatibility between donor and recipient to kidney allograft survival: genome-wide analysis in a prospective cohort
R Reindl-Schwaighofer, A Heinzel, A Kainz… - The Lancet, 2019 - thelancet.com
Background The introduction of HLA matching of donors and recipients was a breakthrough
in kidney transplantation. However, half of all transplanted kidneys still fail within 15 years …
in kidney transplantation. However, half of all transplanted kidneys still fail within 15 years …
Accurate imputation of human leukocyte antigens with CookHLA
The recent development of imputation methods enabled the prediction of human leukocyte
antigen (HLA) alleles from intergenic SNP data, allowing studies to fine-map HLA for …
antigen (HLA) alleles from intergenic SNP data, allowing studies to fine-map HLA for …
Phenome-wide scanning identifies multiple diseases and disease severity phenotypes associated with HLA variants
Although many phenotypes have been associated with variants in human leukocyte antigen
(HLA) genes, the full phenotypic impact of HLA variants across all diseases is unknown. We …
(HLA) genes, the full phenotypic impact of HLA variants across all diseases is unknown. We …