[HTML][HTML] Neural network-based approaches for biomedical relation classification: a review
The explosive growth of biomedical literature has created a rich source of knowledge, such
as that on protein-protein interactions (PPIs) and drug-drug interactions (DDIs), locked in …
as that on protein-protein interactions (PPIs) and drug-drug interactions (DDIs), locked in …
BioWordVec, improving biomedical word embeddings with subword information and MeSH
Distributed word representations have become an essential foundation for biomedical
natural language processing (BioNLP), text mining and information retrieval. Word …
natural language processing (BioNLP), text mining and information retrieval. Word …
Biomedical relation extraction: from binary to complex
Biomedical relation extraction aims to uncover high‐quality relations from life science
literature with high accuracy and efficiency. Early biomedical relation extraction tasks …
literature with high accuracy and efficiency. Early biomedical relation extraction tasks …
[PDF][PDF] Semeval-2013 task 9: Extraction of drug-drug interactions from biomedical texts (ddiextraction 2013)
The DDIExtraction 2013 task concerns the recognition of drugs and extraction of drugdrug
interactions that appear in biomedical literature. We propose two subtasks for the …
interactions that appear in biomedical literature. We propose two subtasks for the …
[HTML][HTML] The DDI corpus: An annotated corpus with pharmacological substances and drug–drug interactions
The management of drug–drug interactions (DDIs) is a critical issue resulting from the
overwhelming amount of information available on them. Natural Language Processing …
overwhelming amount of information available on them. Natural Language Processing …
[HTML][HTML] A hybrid model based on neural networks for biomedical relation extraction
Biomedical relation extraction can automatically extract high-quality biomedical relations
from biomedical texts, which is a vital step for the mining of biomedical knowledge hidden in …
from biomedical texts, which is a vital step for the mining of biomedical knowledge hidden in …
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background Automated extraction of protein-protein interactions (PPI) is an important and
widely studied task in biomedical text mining. We propose a graph kernel based approach …
widely studied task in biomedical text mining. We propose a graph kernel based approach …
[HTML][HTML] BioC: a minimalist approach to interoperability for biomedical text processing
A vast amount of scientific information is encoded in natural language text, and the quantity
of such text has become so great that it is no longer economically feasible to have a human …
of such text has become so great that it is no longer economically feasible to have a human …
[HTML][HTML] PKDE4J: Entity and relation extraction for public knowledge discovery
Due to an enormous number of scientific publications that cannot be handled manually,
there is a rising interest in text-mining techniques for automated information extraction …
there is a rising interest in text-mining techniques for automated information extraction …
Deep learning for extracting protein-protein interactions from biomedical literature
State-of-the-art methods for protein-protein interaction (PPI) extraction are primarily feature-
based or kernel-based by leveraging lexical and syntactic information. But how to …
based or kernel-based by leveraging lexical and syntactic information. But how to …