The influence of a priori grou** on inference of genetic clusters: simulation study and literature review of the DAPC method

JM Miller, CI Cullingham, RM Peery - Heredity, 2020 - nature.com
Inference of genetic clusters is a key aim of population genetics, sparking development of
numerous analytical methods. Within these, there is a conceptual divide between finding de …

The peril of gene-targeted conservation

M Kardos, ABA Shafer - Trends in ecology & evolution, 2018 - cell.com
The genomics revolution has sparked interest in using our increased understanding of the
loci involved in phenotypic variation and adaptation to advance the conservation of …

genodive version 3.0: Easy‐to‐use software for the analysis of genetic data of diploids and polyploids

PG Meirmans - Molecular Ecology Resources, 2020 - Wiley Online Library
Abstract genodive version 3.0 is a user‐friendly program for the analysis of population
genetic data. This version presents a major update from the previous version and now offers …

Seascape genomics provides evidence for thermal adaptation and current‐mediated population structure in American lobster (Homarus americanus)

L Benestan, BK Quinn, H Maaroufi, M Laporte… - Molecular …, 2016 - Wiley Online Library
Investigating how environmental features shape the genetic structure of populations is
crucial for understanding how they are potentially adapted to their habitats, as well as for …

Gene flow creates a mirage of cryptic species in a Southeast Asian spotted stream frog complex

KO Chan, CR Hutter, PL Wood Jr, LL Grismer… - Molecular …, 2020 - Wiley Online Library
Most new cryptic species are described using conventional tree‐and distance‐based
species delimitation methods (SDMs), which rely on phylogenetic arrangements and …

Conservation genomics of natural and managed populations: building a conceptual and practical framework

LM Benestan, AL Ferchaud, PA Hohenlohe, BA Garner… - 2016 - Wiley Online Library
The boom of massive parallel sequencing (MPS) technology and its applications in
conservation of natural and managed populations brings new opportunities and challenges …

Copy number variants outperform SNPs to reveal genotype–temperature association in a marine species

Y Dorant, H Cayuela, K Wellband, M Laporte… - Molecular …, 2020 - Wiley Online Library
Copy number variants (CNVs) are a major component of genotypic and phenotypic variation
in genomes. To date, our knowledge of genotypic variation and evolution has largely been …

Asymmetric oceanographic processes mediate connectivity and population genetic structure, as revealed by RAD seq, in a highly dispersive marine invertebrate …

A Xuereb, L Benestan, É Normandeau… - Molecular …, 2018 - Wiley Online Library
Marine populations are typically characterized by weak genetic differentiation due to the
potential for long‐distance dispersal favouring high levels of gene flow. However, strong …

[HTML][HTML] A genomic perspective on an old question: Salmo trouts or Salmo trutta (Teleostei: Salmonidae)?

IH Segherloo, J Freyhof, P Berrebi, AL Ferchaud… - Molecular Phylogenetics …, 2021 - Elsevier
There are particular challenges in defining the taxonomic status of recently radiated groups
due to the low level of phylogenetic signal. Members of the Salmo trutta species-complex …

A climate-associated multispecies cryptic cline in the northwest Atlantic

RRE Stanley, C DiBacco, B Lowen, RG Beiko… - Science …, 2018 - science.org
The spatial genetic structure of most species in the open marine environment remains
largely unresolved. This information gap creates uncertainty in the sustainable …