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Enhancer selectivity in space and time: from enhancer–promoter interactions to promoter activation
The primary regulators of metazoan gene expression are enhancers, originally functionally
defined as DNA sequences that can activate transcription at promoters in an orientation …
defined as DNA sequences that can activate transcription at promoters in an orientation …
The epithelial–mesenchymal plasticity landscape: principles of design and mechanisms of regulation
Epithelial–mesenchymal plasticity (EMP) enables cells to interconvert between several
states across the epithelial–mesenchymal landscape, thereby acquiring hybrid epithelial …
states across the epithelial–mesenchymal landscape, thereby acquiring hybrid epithelial …
Single-cell nascent RNA sequencing unveils coordinated global transcription
Transcription is the primary regulatory step in gene expression. Divergent transcription
initiation from promoters and enhancers produces stable RNAs from genes and unstable …
initiation from promoters and enhancers produces stable RNAs from genes and unstable …
The self-organizing genome: principles of genome architecture and function
T Misteli - Cell, 2020 - cell.com
Genomes have complex three-dimensional architectures. The recent convergence of
genetic, biochemical, biophysical, and cell biological methods has uncovered several …
genetic, biochemical, biophysical, and cell biological methods has uncovered several …
RNA-mediated feedback control of transcriptional condensates
Regulation of biological processes typically incorporates mechanisms that initiate and
terminate the process and, where understood, these mechanisms often involve feedback …
terminate the process and, where understood, these mechanisms often involve feedback …
Pioneer transcription factors initiating gene network changes
KS Zaret - Annual review of genetics, 2020 - annualreviews.org
Pioneer transcription factors have the intrinsic biochemical ability to scan partial DNA
sequence motifs that are exposed on the surface of a nucleosome and thus access silent …
sequence motifs that are exposed on the surface of a nucleosome and thus access silent …
The epigenetic basis of cellular heterogeneity
Single-cell sequencing-based methods for profiling gene transcript levels have revealed
substantial heterogeneity in expression levels among morphologically indistinguishable …
substantial heterogeneity in expression levels among morphologically indistinguishable …
Genomic encoding of transcriptional burst kinetics
Mammalian gene expression is inherently stochastic,, and results in discrete bursts of RNA
molecules that are synthesized from each allele,,,–. Although transcription is known to be …
molecules that are synthesized from each allele,,,–. Although transcription is known to be …
A phase separation model for transcriptional control
Phase-separated multi-molecular assemblies provide a general regulatory mechanism to
compartmentalize biochemical reactions within cells. We propose that a phase separation …
compartmentalize biochemical reactions within cells. We propose that a phase separation …
Circ3823 contributes to growth, metastasis and angiogenesis of colorectal cancer: involvement of miR-30c-5p/TCF7 axis
Y Guo, Y Guo, C Chen, D Fan, X Wu, L Zhao, B Shao… - Molecular cancer, 2021 - Springer
Background Colorectal cancer (CRC) is one of the most common malignant tumours. The
recurrence and metastasis of CRC seriously affect the survival rate of patients. Angiogenesis …
recurrence and metastasis of CRC seriously affect the survival rate of patients. Angiogenesis …