Importance of genetic diversity assessment in crop plants and its recent advances: an overview of its analytical perspectives

M Govindaraj, M Vetriventhan… - Genetics research …, 2015 - Wiley Online Library
The importance of plant genetic diversity (PGD) is now being recognized as a specific area
since exploding population with urbanization and decreasing cultivable lands are the critical …

Bacillus thuringiensis Toxins: An Overview of Their Biocidal Activity

L Palma, D Muñoz, C Berry, J Murillo, P Caballero - Toxins, 2014 - mdpi.com
Bacillus thuringiensis (Bt) is a Gram positive, spore-forming bacterium that synthesizes
parasporal crystalline inclusions containing Cry and Cyt proteins, some of which are toxic …

A new view of the fish gut microbiome: advances from next-generation sequencing

M Ghanbari, W Kneifel, KJ Domig - Aquaculture, 2015 - Elsevier
The fish gut microbiota contributes to digestion and can affect the nutrition, growth,
reproduction, overall population dynamics and vulnerability of the host fish to disease; …

Transcriptome analysis using next-generation sequencing

KO Mutz, A Heilkenbrinker, M Lönne, JG Walter… - Current opinion in …, 2013 - Elsevier
Up to date research in biology, biotechnology, and medicine requires fast genome and
transcriptome analysis technologies for the investigation of cellular state, physiology, and …

Systematic transcriptome wide analysis of lncRNA-miRNA interactions

S Jalali, D Bhartiya, MK Lalwani, S Sivasubbu… - PloS one, 2013 - journals.plos.org
Background Long noncoding RNAs (lncRNAs) are a recently discovered class of non-
protein coding RNAs, which have now increasingly been shown to be involved in a wide …

Mass spectrometry–based proteomics and network biology

A Bensimon, AJR Heck… - Annual review of …, 2012 - annualreviews.org
In the life sciences, a new paradigm is emerging that places networks of interacting
molecules between genotype and phenotype. These networks are dynamically modulated …

Next-generation sequence assembly: four stages of data processing and computational challenges

S El-Metwally, T Hamza, M Zakaria… - PLoS computational …, 2013 - journals.plos.org
Decoding DNA symbols using next-generation sequencers was a major breakthrough in
genomic research. Despite the many advantages of next-generation sequencers, eg, the …

Current challenges in de novo plant genome sequencing and assembly

MC Schatz, J Witkowski, WR McCombie - Genome biology, 2012 - Springer
Current challenges in de novo plant genome sequencing and assembly | Genome Biology
Skip to main content SpringerLink Account Menu Find a journal Publish with us Track your …

Community fingerprinting in a sequencing world

J van Dorst, A Bissett, AS Palmer… - FEMS microbiology …, 2014 - academic.oup.com
Despite decreasing costs, generating large-scale, well-replicated and multivariate microbial
ecology investigations with sequencing remains an expensive and time-consuming option …

RNA-seq and microarray complement each other in transcriptome profiling

S Kogenaru, Q Yan, Y Guo, N Wang - BMC genomics, 2012 - Springer
Background RNA-seq and microarray are the two popular methods employed for genome-
wide transcriptome profiling. Current comparison studies have shown that transcriptome …