The biologically relevant coordination chemistry of iron and nitric oxide: electronic structure and reactivity

N Lehnert, E Kim, HT Dong, JB Harland… - Chemical …, 2021 - ACS Publications
Nitric oxide (NO) is an important signaling molecule that is involved in a wide range of
physiological and pathological events in biology. Metal coordination chemistry, especially …

Myxobacteria: moving, killing, feeding, and surviving together

J Muñoz-Dorado, FJ Marcos-Torres… - Frontiers in …, 2016 - frontiersin.org
Myxococcus xanthus, like other myxobacteria, is a social bacterium that moves and feeds
cooperatively in predatory groups. On surfaces, rod-shaped vegetative cells move in search …

A computational framework to explore large-scale biosynthetic diversity

JC Navarro-Muñoz, N Selem-Mojica… - Nature chemical …, 2020 - nature.com
Genome mining has become a key technology to exploit natural product diversity. Although
initially performed on a single-genome basis, the process is now being scaled up to mine …

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

P Cimermancic, MH Medema, J Claesen, K Kurita… - Cell, 2014 - cell.com
Although biosynthetic gene clusters (BGCs) have been discovered for hundreds of bacterial
metabolites, our knowledge of their diversity remains limited. Here, we used a novel …

MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm

YW Wu, YH Tang, SG Tringe, BA Simmons, SW Singer - Microbiome, 2014 - Springer
Background Recovering individual genomes from metagenomic datasets allows access to
uncultivated microbial populations that may have important roles in natural and engineered …

An environmental bacterial taxon with a large and distinct metabolic repertoire

MC Wilson, T Mori, C Rückert, AR Uria, MJ Helf… - Nature, 2014 - nature.com
Cultivated bacteria such as actinomycetes are a highly useful source of biomedically
important natural products. However, such 'talented'producers represent only a minute …

The cognitive cell: bacterial behavior reconsidered

P Lyon - Frontiers in microbiology, 2015 - frontiersin.org
Research on how bacteria adapt to changing environments underlies the contemporary
biological understanding of signal transduction (ST), and ST provides the foundation of the …

Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

ABR McIntyre, R Ounit, E Afshinnekoo, RJ Prill… - Genome biology, 2017 - Springer
Background One of the main challenges in metagenomics is the identification of
microorganisms in clinical and environmental samples. While an extensive and …

Gifted microbes for genome mining and natural product discovery

RH Baltz - Journal of Industrial Microbiology and Biotechnology, 2017 - academic.oup.com
Actinomycetes are historically important sources for secondary metabolites (SMs) with
applications in human medicine, animal health, and plant crop protection. It is now clear that …

Calcium promotes persistent soil organic matter by altering microbial transformation of plant litter

IA Shabtai, RC Wilhelm, SA Schweizer… - Nature …, 2023 - nature.com
Calcium (Ca) can contribute to soil organic carbon (SOC) persistence by mediating physico-
chemical interactions between organic compounds and minerals. Yet, Ca is also crucial for …