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The persistent threat of emerging plant disease pandemics to global food security
JB Ristaino, PK Anderson, DP Bebber… - Proceedings of the …, 2021 - pnas.org
Plant disease outbreaks are increasing and threaten food security for the vulnerable in many
areas of the world. Now a global human pandemic is threatening the health of millions on …
areas of the world. Now a global human pandemic is threatening the health of millions on …
Plant NLR immunity activation and execution: a biochemical perspective
Plants deploy cell-surface and intracellular receptors to detect pathogen attack and trigger
innate immune responses. Inside host cells, families of nucleotide-binding/leucine-rich …
innate immune responses. Inside host cells, families of nucleotide-binding/leucine-rich …
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
SST Mak, S Gopalakrishnan, C Carøe, C Geng… - …, 2017 - academic.oup.com
Ancient DNA research has been revolutionized following development of next-generation
sequencing platforms. Although a number of such platforms have been applied to ancient …
sequencing platforms. Although a number of such platforms have been applied to ancient …
Evolution of Phytophthora infestans on its potato host since the Irish potato famine
A Coomber, A Saville, JB Ristaino - Nature Communications, 2024 - nature.com
Phytophthora infestans is a major oomycete plant pathogen, responsible for potato late
blight, which led to the Irish Potato Famine from 1845–1852. Since then, potatoes resistant …
blight, which led to the Irish Potato Famine from 1845–1852. Since then, potatoes resistant …
The recovery, interpretation and use of ancient pathogen genomes
The ability to sequence genomes from ancient biological material has provided a rich source
of information for evolutionary biology and engaged considerable public interest. Although …
of information for evolutionary biology and engaged considerable public interest. Although …
Plagues upon the Earth: disease and the course of human history
K Harper - 2021 - torrossa.com
Introduction microorganisms and macrohistory one of the chief blessings of living in the
modern world is supposed to be that the risk of dying from an infectious disease has become …
modern world is supposed to be that the risk of dying from an infectious disease has become …
Comparative performance of popular methods for hybrid detection using genomic data
S Kong, LS Kubatko - Systematic Biology, 2021 - academic.oup.com
Interspecific hybridization is an important evolutionary phenomenon that generates genetic
variability in a population and fosters species diversity in nature. The availability of large …
variability in a population and fosters species diversity in nature. The availability of large …
Population genomics of fungal and oomycete pathogens
NJ Grünwald, BA McDonald… - Annual Review of …, 2016 - annualreviews.org
We are entering a new era in plant pathology in which whole-genome sequences of many
individuals of a pathogen species are becoming readily available. Population genomics …
individuals of a pathogen species are becoming readily available. Population genomics …
Coexistence of multiple endemic and pandemic lineages of the rice blast pathogen
P Gladieux, S Ravel, A Rieux, S Cros-Arteil, H Adreit… - MBio, 2018 - journals.asm.org
The rice blast fungus Magnaporthe oryzae (syn., Pyricularia oryzae) is both a threat to global
food security and a model for plant pathology. Molecular pathologists need an accurate …
food security and a model for plant pathology. Molecular pathologists need an accurate …
Gene flow analysis method, the D-statistic, is robust in a wide parameter space
Y Zheng, A Janke - BMC bioinformatics, 2018 - Springer
Background We evaluated the sensitivity of the D-statistic, a parsimony-like method widely
used to detect gene flow between closely related species. This method has been applied to …
used to detect gene flow between closely related species. This method has been applied to …