Finding the genomic basis of local adaptation: pitfalls, practical solutions, and future directions

S Hoban, JL Kelley, KE Lotterhos… - The American …, 2016 - journals.uchicago.edu
Uncovering the genetic and evolutionary basis of local adaptation is a major focus of
evolutionary biology. The recent development of cost-effective methods for obtaining high …

The genomic consequences of hybridization

BM Moran, C Payne, Q Langdon, DL Powell… - Elife, 2021 - elifesciences.org
In the past decade, advances in genome sequencing have allowed researchers to uncover
the history of hybridization in diverse groups of species, including our own. Although the …

Stacks 2: Analytical methods for paired‐end sequencing improve RADseq‐based population genomics

NC Rochette, AG Rivera‐Colón… - Molecular ecology, 2019 - Wiley Online Library
For half a century population genetics studies have put type II restriction endonucleases to
work. Now, coupled with massively‐parallel, short‐read sequencing, the family of RAD …

Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

M Ravinet, R Faria, RK Butlin, J Galindo… - Journal of …, 2017 - academic.oup.com
Speciation, the evolution of reproductive isolation among populations, is continuous,
complex, and involves multiple, interacting barriers. Until it is complete, the effects of this …

Defining the speciation continuum

S Stankowski, M Ravinet - Evolution, 2021 - academic.oup.com
A primary roadblock to our understanding of speciation is that it usually occurs over a
timeframe that is too long to study from start to finish. The idea of a speciation continuum …

[BUKU][B] Eco-evolutionary dynamics

AP Hendry - 2017 - degruyter.com
In recent years, scientists have realized that evolution can occur on timescales much shorter
than the" long lapse of ages" emphasized by Darwin—in fact, evolutionary change is …

Contrasting signatures of genomic divergence during sympatric speciation

AF Kautt, CF Kratochwil, A Nater… - Nature, 2020 - nature.com
The transition from 'well-marked varieties' of a single species into 'well-defined species'—
especially in the absence of geographic barriers to gene flow (sympatric speciation)—has …

Phylogenomic approaches to detecting and characterizing introgression

MS Hibbins, MW Hahn - Genetics, 2022 - academic.oup.com
Phylogenomics has revealed the remarkable frequency with which introgression occurs
across the tree of life. These discoveries have been enabled by the rapid growth of methods …

The importance of intrinsic postzygotic barriers throughout the speciation process

JM Coughlan, DR Matute - Philosophical Transactions of …, 2020 - royalsocietypublishing.org
Intrinsic postzygotic barriers can play an important and multifaceted role in speciation, but
their contribution is often thought to be reserved to the final stages of the speciation process …

Making sense of genomic islands of differentiation in light of speciation

JBW Wolf, H Ellegren - Nature Reviews Genetics, 2017 - nature.com
As populations diverge, genetic differences accumulate across the genome. Spurred by
rapid developments in sequencing technology, genome-wide population surveys of natural …