Genomic instability in cancer: teetering on the limit of tolerance

N Andor, CC Maley, HP Ji - Cancer research, 2017 - AACR
Cancer genomic instability contributes to the phenomenon of intratumoral genetic
heterogeneity, provides the genetic diversity required for natural selection, and enables the …

Biological evolution through mutation, selection, and drift: An introductory review

E Baake, W Gabriel - Annual Reviews of Computational Physics, 2000 - books.google.com
5.1. 5. Error thresholds in finite populations 241 5.1. 6. Clues from the real world 244 5.2.
Muller's ratchet 245 5.2. 1. Ratchet dynamics 246 5.2. 2. Error thresholds versus Muller's …

Examining the theory of error catastrophe

J Summers, S Litwin - Journal of virology, 2006 - Am Soc Microbiol
This discussion attempts to present a simple explanation of the current theory of error
catastrophe and why it does not herald a paradigm shift in antiviral strategy. In the main text …

Physics of cancer: the impact of heterogeneity

Q Zhang, RH Austin - Annu. Rev. Condens. Matter Phys., 2012 - annualreviews.org
It is a common mistake to view cancer as a single disease with a single possible cure which
we have just not found yet. In reality cancer takes on many forms that share a common …

Genomic mutation rates that neutralize adaptive evolution and natural selection

PJ Gerrish, A Colato… - Journal of The Royal …, 2013 - royalsocietypublishing.org
When mutation rates are low, natural selection remains effective, and increasing the
mutation rate can give rise to an increase in adaptation rate. When mutation rates are high to …

Dynamics and fate of beneficial mutations under lineage contamination by linked deleterious mutations

S Pénisson, T Singh, P Sniegowski, P Gerrish - Genetics, 2017 - academic.oup.com
Beneficial mutations drive adaptive evolution, yet their selective advantage does not ensure
their fixation. Haldane's application of single-type branching process theory showed that …

Evolutionary models predict potential mechanisms of escape from mutational meltdown

C Bank, MA Schmitz, AY Morales-Arce - Frontiers in Virology, 2022 - frontiersin.org
Mutagenic drugs are promising candidates for the treatment of various RNA virus infections.
Increasing the mutation rate of the virus leads to rapid accumulation of deleterious mutation …

An Elementary Microscopic Model of Sympatric Speciation

F Bagnoli, T Matteuzzi - arxiv preprint arxiv:2501.08130, 2025 - arxiv.org
Using as a narrative theme the example of Darwin's finches, a microscopic agent-based
model is introduces to study sympatric speciation as a result of competition for resources in …

Does sex induce a phase transition?

PMC De Oliveira, S Moss de Oliveira, D Stauffer… - The European Physical …, 2008 - Springer
We discovered a dynamic phase transition induced by sexual reproduction. The dynamics is
a pure Darwinian rule applied to diploid bit-strings with both fundamental ingredients to …

An evolutionary model for simple ecosystems

F Bagnoli, M Bezzi - Annual Reviewies of Computational …, 2000 - books.google.com
In this review some simple models of asexual populations evolving on smooth landscapes
are studied. The basic model is based on a cellular automaton, which is analyzed here in …