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Cross-linking mass spectrometry (XL-MS): An emerging technology for interactomics and structural biology
Protein-protein interactions are fundamental to the formation of intricate interaction networks
and the assembly of multisubunit protein complexes that represent the functional …
and the assembly of multisubunit protein complexes that represent the functional …
Combining cryo-electron microscopy (cryo-EM) and cross-linking mass spectrometry (CX-MS) for structural elucidation of large protein assemblies
C Schmidt, H Urlaub - Current opinion in structural biology, 2017 - Elsevier
Highlights•CX-MS identifies protein–protein interactions.•Cross-linking strategies targeting
different amino acids are available.•Combining CX-MS and cryo-EM delivers high-resolution …
different amino acids are available.•Combining CX-MS and cryo-EM delivers high-resolution …
Identification and characterization of protein cross-links induced by oxidative reactions
Introduction: Protein cross-links are common in biological systems and are generated both
deliberately as a part of normal metabolism and also accidently as a result of exposure to …
deliberately as a part of normal metabolism and also accidently as a result of exposure to …
Identification of MS-cleavable and noncleavable chemically cross-linked peptides with MetaMorpheus
Protein chemical cross-linking combined with mass spectrometry has become an important
technique for the analysis of protein structure and protein–protein interactions. A variety of …
technique for the analysis of protein structure and protein–protein interactions. A variety of …
Mass-Spectrometry-Based Identification of Cross-Links in Proteins Exposed to Photo-Oxidation and Peroxyl Radicals Using 18O Labeling and Optimized Tandem …
Protein cross-links are formed in regulated biochemical processes in many biological
systems, but they are also generated inadvertently via the reactions of exogenous or …
systems, but they are also generated inadvertently via the reactions of exogenous or …
The Vaccinia virion: Filling the gap between atomic and ultrastructure
Y Mirzakhanyan, P Gershon - PLoS Pathogens, 2019 - journals.plos.org
We have investigated the molecular-level structure of the Vaccinia virion in situ by protein-
protein chemical crosslinking, identifying 4609 unique-mass crosslink ions at an effective …
protein chemical crosslinking, identifying 4609 unique-mass crosslink ions at an effective …
Cross‐linked peptide identification: A computational forest of algorithms
Ş Yılmaz, GA Shiferaw, J Rayo… - Mass spectrometry …, 2018 - Wiley Online Library
Chemical cross‐linking analyzed by mass spectrometry (XL‐MS) has become an important
tool in unravelling protein structure, dynamics, and complex formation. Because the analysis …
tool in unravelling protein structure, dynamics, and complex formation. Because the analysis …
Structural investigation of proteins and protein complexes by chemical cross-linking/mass spectrometry
C Piotrowski, A Sinz - Integrative Structural Biology with Hybrid Methods, 2018 - Springer
During the last two decades, cross-linking combined with mass spectrometry (MS) has
evolved as a valuable tool to gain structural insights into proteins and protein assemblies …
evolved as a valuable tool to gain structural insights into proteins and protein assemblies …
ECL 3.0: a sensitive peptide identification tool for cross-linking mass spectrometry data analysis
Background Cross-linking mass spectrometry (XL-MS) is a powerful technique for detecting
protein–protein interactions (PPIs) and modeling protein structures in a high-throughput …
protein–protein interactions (PPIs) and modeling protein structures in a high-throughput …
Exhaustively identifying cross-linked peptides with a linear computational complexity
Chemical cross-linking coupled to mass spectrometry is a powerful tool to study protein–
protein interactions and protein conformations. Two linked peptides are ionized and …
protein interactions and protein conformations. Two linked peptides are ionized and …