A survey of statistical model checking

G Agha, K Palmskog - ACM Transactions on Modeling and Computer …, 2018 - dl.acm.org
Interactive, distributed, and embedded systems often behave stochastically, for example,
when inputs, message delays, or failures conform to a probability distribution. However …

Asac: Automatic sensitivity analysis for approximate computing

P Roy, R Ray, C Wang, WF Wong - Proceedings of the 2014 SIGPLAN …, 2014 - dl.acm.org
The approximation based programming paradigm is especially attractive for develo**
error-resilient applications, targeting low power embedded devices. It allows for program …

Mathematical modeling of variability in intracellular signaling

C Loos, J Hasenauer - Current Opinion in Systems Biology, 2019 - Elsevier
Cellular signaling is essential in information processing and decision-making. Therefore, a
variety of experimental approaches have been developed to study signaling on bulk and …

PAC statistical model checking for Markov decision processes and stochastic games

P Ashok, J Křetínský, M Weininger - … Conference, CAV 2019, New York City …, 2019 - Springer
Statistical model checking (SMC) is a technique for analysis of probabilistic systems that
may be (partially) unknown. We present an SMC algorithm for (unbounded) reachability …

Approximate circuits

S Reda, M Shafique - Cham: Springer, 2019 - Springer
Approximate computing has emerged as a new paradigm to reduce the resources (eg,
design area and power) required to realize digital systems at the expense of a negligible or …

Relating simulation studies by provenance—Develo** a family of Wnt signaling models

K Budde, J Smith, P Wilsdorf, F Haack… - PLOS Computational …, 2021 - journals.plos.org
For many biological systems, a variety of simulation models exist. A new simulation model is
rarely developed from scratch, but rather revises and extends an existing one. A key …

Significance of p53 dynamics in regulating apoptosis in response to ionizing radiation and polypharmacological strategies

B Liu, D Bhatt, ZN Oltvai, JS Greenberger, I Bahar - Scientific Reports, 2014 - nature.com
Develo** pharmacological strategies for controlling ionizing radiation (IR)-induced cell
death is important for both mitigating radiation damage and alleviating the side effects of anti …

Modeling early treatment response in AML from cell-free tumor DNA

D Wang, C Rausch, SA Buerger, S Tschuri… - Iscience, 2023 - cell.com
Monitoring disease response after intensive chemotherapy for acute myeloid leukemia
(AML) currently requires invasive bone marrow biopsies, imposing a significant burden on …

Statistical model checking for biological applications

P Zuliani - International Journal on Software Tools for Technology …, 2015 - Springer
In this paper, we survey recent work on the use of statistical model checking techniques for
biological applications. We begin with an overview of the basic modelling techniques for …

Parameter estimation of rule-based models using statistical model checking

B Liu, JR Faeder - 2016 IEEE International Conference on …, 2016 - ieeexplore.ieee.org
Rule-based modeling with BioNetGen has been widely used to study the dynamics of
complex biochemical systems. Rule-based models can be analyzed by carrying out …