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Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
The best practice for microbiome analysis using R
With the gradual maturity of sequencing technology, many microbiome studies have
published, driving the emergence and advance of related analysis tools. R language is the …
published, driving the emergence and advance of related analysis tools. R language is the …
Pervasive associations between dark septate endophytic fungi with tree root and soil microbiomes across Europe
T Netherway, J Bengtsson, F Buegger… - Nature …, 2024 - nature.com
Trees interact with a multitude of microbes through their roots and root symbionts such as
mycorrhizal fungi and root endophytes. Here, we explore the role of fungal root symbionts as …
mycorrhizal fungi and root endophytes. Here, we explore the role of fungal root symbionts as …
Regional-scale in-depth analysis of soil fungal diversity reveals strong pH and plant species effects in Northern Europe
Soil microbiome has a pivotal role in ecosystem functioning, yet little is known about its build-
up from local to regional scales. In a multi-year regional-scale survey involving 1251 plots …
up from local to regional scales. In a multi-year regional-scale survey involving 1251 plots …
Three decades of increasing fish biodiversity across the northeast Atlantic and the Arctic Ocean
Observed range shifts of numerous species support predictions of climate change models
that species will shift their distribution northward into the Arctic and sub-Arctic seas due to …
that species will shift their distribution northward into the Arctic and sub-Arctic seas due to …
Automated assessment reveals that the extinction risk of reptiles is widely underestimated across space and phylogeny
The Red List of Threatened Species, published by the International Union for Conservation
of Nature (IUCN), is a crucial tool for conservation decision-making. However, despite …
of Nature (IUCN), is a crucial tool for conservation decision-making. However, despite …
The influence of tree genus, phylogeny, and richness on the specificity, rarity, and diversity of ectomycorrhizal fungi
Partner specificity is a well‐documented phenomenon in biotic interactions, yet the factors
that determine specificity in plant‐fungal associations remain largely unknown. By utilizing …
that determine specificity in plant‐fungal associations remain largely unknown. By utilizing …
Trajectory analysis in community ecology
Ecologists have long been interested in how communities change over time. Addressing
questions about community dynamics requires ways of representing and comparing the …
questions about community dynamics requires ways of representing and comparing the …
Alien species and climate change drive shifts in a riverine fish community and trait compositions over 35 years
Alien fish substantially impact aquatic communities. However, their effects on trait
composition remain poorly understood, especially at large spatiotemporal scales. Here, we …
composition remain poorly understood, especially at large spatiotemporal scales. Here, we …
Global dominance of lianas over trees is driven by forest disturbance, climate and topography
Growing evidence suggests that liana competition with trees is threatening the global carbon
sink by slowing the recovery of forests following disturbance. A recent theory based on local …
sink by slowing the recovery of forests following disturbance. A recent theory based on local …