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SpliceAI-visual: a free online tool to improve SpliceAI splicing variant interpretation
SpliceAI is an open-source deep learning splicing prediction algorithm that has
demonstrated in the past few years its high ability to predict splicing defects caused by DNA …
demonstrated in the past few years its high ability to predict splicing defects caused by DNA …
ErbB receptors and cancer
Z Wang - ErbB receptor signaling: methods and protocols, 2017 - Springer
The ErbB receptor family, also known as the EGF receptor family or type I receptor family,
includes the epidermal growth factor (EGF) receptor (EGFR) or ErbB1/Her1, ErbB2/Her2 …
includes the epidermal growth factor (EGF) receptor (EGFR) or ErbB1/Her1, ErbB2/Her2 …
Deep intronic mutations and human disease
Next-generation sequencing has revolutionized clinical diagnostic testing. Yet, for a
substantial proportion of patients, sequence information restricted to exons and exon–intron …
substantial proportion of patients, sequence information restricted to exons and exon–intron …
Emerging applications of machine learning in genomic medicine and healthcare
The integration of artificial intelligence technologies has propelled the progress of clinical
and genomic medicine in recent years. The significant increase in computing power has …
and genomic medicine in recent years. The significant increase in computing power has …
Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …
methods and in rational drug design, the increase in approved drugs in the past decade did …
Lessons from non-canonical splicing
Recent improvements in experimental and computational techniques that are used to study
the transcriptome have enabled an unprecedented view of RNA processing, revealing many …
the transcriptome have enabled an unprecedented view of RNA processing, revealing many …
Intron retention is a widespread mechanism of tumor-suppressor inactivation
A substantial fraction of disease-causing mutations are pathogenic through aberrant
splicing. Although genome profiling studies have identified somatic single-nucleotide …
splicing. Although genome profiling studies have identified somatic single-nucleotide …
Machine learning in genomic medicine: a review of computational problems and data sets
In this paper, we provide an introduction to machine learning tasks that address important
problems in genomic medicine. One of the goals of genomic medicine is to determine how …
problems in genomic medicine. One of the goals of genomic medicine is to determine how …
Blood RNA analysis can increase clinical diagnostic rate and resolve variants of uncertain significance
Purpose Diagnosis of genetic disorders is hampered by large numbers of variants of
uncertain significance (VUSs) identified through next-generation sequencing. Many such …
uncertain significance (VUSs) identified through next-generation sequencing. Many such …
Detection of aberrant splicing events in RNA-seq data using FRASER
Aberrant splicing is a major cause of rare diseases. However, its prediction from genome
sequence alone remains in most cases inconclusive. Recently, RNA sequencing has proven …
sequence alone remains in most cases inconclusive. Recently, RNA sequencing has proven …