Therapeutic cancer vaccines: advancements, challenges and prospects

T Fan, M Zhang, J Yang, Z Zhu, W Cao… - Signal Transduction and …, 2023 - nature.com
With the development and regulatory approval of immune checkpoint inhibitors and adoptive
cell therapies, cancer immunotherapy has undergone a profound transformation over the …

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand …

B Reynisson, B Alvarez, S Paul, B Peters… - Nucleic acids …, 2020 - academic.oup.com
Major histocompatibility complex (MHC) molecules are expressed on the cell surface, where
they present peptides to T cells, which gives them a key role in the development of T-cell …

[HTML][HTML] The biogenesis of the immunopeptidome

A Admon - Seminars in Immunology, 2023 - Elsevier
The immunopeptidome is the repertoire of peptides bound and presented by the MHC class
I, class II, and non-classical molecules. The peptides are produced by the degradation of …

Improved prediction of MHC II antigen presentation through integration and motif deconvolution of mass spectrometry MHC eluted ligand data

B Reynisson, C Barra, S Kaabinejadian… - Journal of proteome …, 2020 - ACS Publications
Major histocompatibility complex II (MHC II) molecules play a vital role in the onset and
control of cellular immunity. In a highly selective process, MHC II presents peptides derived …

Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes

J Racle, J Michaux, GA Rockinger, M Arnaud… - Nature …, 2019 - nature.com
Predictions of epitopes presented by class II human leukocyte antigen molecules (HLA-II)
have limited accuracy, restricting vaccine and therapy design. Here we combined unbiased …

[HTML][HTML] Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes

J Racle, P Guillaume, J Schmidt, J Michaux, A Larabi… - Immunity, 2023 - cell.com
CD4+ T cells orchestrate the adaptive immune response against pathogens and cancer by
recognizing epitopes presented on class II major histocompatibility complex (MHC-II) …

New peptides with immunomodulatory activity identified from rice proteins through peptidomic and in silico analysis

L Wen, L Huang, Y Li, Y Feng, Z Zhang, Z Xu, ML Chen… - Food Chemistry, 2021 - Elsevier
The new food-derived bio-functional peptides are urgently needed globally, but the
separation and purification process for obtaining the immunopeptides from food is low …

Toward drug-like multispecific antibodies by design

MS Sawant, CN Streu, L Wu, PM Tessier - International journal of …, 2020 - mdpi.com
The success of antibody therapeutics is strongly influenced by their multifunctional nature
that couples antigen recognition mediated by their variable regions with effector functions …

Neoantigens in hematologic malignancies

MA Biernacki, M Bleakley - Frontiers in immunology, 2020 - frontiersin.org
T cell cancer neoantigens are created from peptides derived from cancer-specific aberrant
proteins, such as mutated and fusion proteins, presented in complex with human leukocyte …

Challenges targeting cancer neoantigens in 2021: a systematic literature review

I Chen, MY Chen, SP Goedegebuure… - Expert review of …, 2021 - Taylor & Francis
Introduction: Cancer neoantigens represent important targets of cancer immunotherapy. The
goal of cancer neoantigen vaccines is to induce neoantigen-specific immune responses and …