A computational screen for alternative genetic codes in over 250,000 genomes

Y Shulgina, SR Eddy - Elife, 2021 - elifesciences.org
The genetic code has been proposed to be a 'frozen accident,'but the discovery of
alternative genetic codes over the past four decades has shown that it can evolve to some …

[PDF][PDF] Four new species and a ribosomal phylogeny of Rhabdopleura (Hemichordata: Graptolithina) from New Zealand, with a review and key to all described extant …

DP Gordon, ZBR Quek, D Huang - Zootaxa, 2024 - researchgate.net
All eight extant species of Rhabdopleura described between 1869 and 2018 are
provisionally accepted as valid based on a review of the literature and new data on two little …

[HTML][HTML] Mitochondrial genomic landscape: a portrait of the mitochondrial genome 40 years after the first complete sequence

A Formaggioni, A Luchetti, F Plazzi - Life, 2021 - mdpi.com
Notwithstanding the initial claims of general conservation, mitochondrial genomes are a
largely heterogeneous set of organellar chromosomes which displays a bewildering …

Stop or not: genome-wide profiling of reassigned stop codons in ciliates

W Chen, Y Geng, B Zhang, Y Yan… - … Biology and Evolution, 2023 - academic.oup.com
Bifunctional stop codons that have both translation and termination functions in the same
species are important for understanding the evolution and function of genetic codes in living …

Ancient endosymbiont‐mediated transmission of a selfish gene provides a model for overcoming barriers to gene transfer into animal mitochondrial genomes

GG Shimpi, B Bentlage - BioEssays, 2023 - Wiley Online Library
In contrast to bilaterian animals, non‐bilaterian mitochondrial genomes contain atypical
genes, often attributed to horizontal gene transfer (HGT) as an ad hoc explanation. Although …

A Silurian pseudocolonial pterobranch

DEG Briggs, NM Koch - Current Biology, 2023 - cell.com
Pterobranchs, a major group of the phylum Hemichordata, first appear in the fossil record
during the Cambrian, 1 and there are more than 600 fossil genera dominated by the mainly …

Deep-sea acorn worms (Enteropneusta) from the Bering Sea with the description of a new genus and a new species of Torquaratoridae dominating soft-bottom …

OV Ezhova, AI Lukinykh, SV Galkin, EM Krylova… - Deep Sea Research …, 2022 - Elsevier
Five species of deep-sea acorn worms (Enteropneusta) were found in the Bering Sea during
cruises of the RV Akademik MA Lavrentyev in 2016, 2018, and 2021. The worms were …

A new species of deep‐sea torquaratorid enteropneust (Hemichordata): A sequential hermaphrodite with exceptionally wide lips

ND Holland, AS Hiley, GW Rouse - Invertebrate Biology, 2022 - Wiley Online Library
Specimens of a new species of torquaratorid acorn worm (Hemichordata, Enteropneusta)
were video recorded and subsequently collected at abyssal depths in the eastern North …

Mitochondrially mediated RNA interference, a retrograde signaling system affecting nuclear gene expression

F Plazzi, Y Le Cras, A Formaggioni, M Passamonti - Heredity, 2024 - nature.com
Several functional classes of short noncoding RNAs are involved in manifold regulatory
processes in eukaryotes, including, among the best characterized, miRNAs. One of the most …

Another blow to the conserved gene order in Annelida: evidence from mitochondrial genomes of the calcareous tubeworm genus Hydroides

Y Sun, G Daffe, Y Zhang, J Pons, JW Qiu… - Molecular Phylogenetics …, 2021 - Elsevier
Mitochondrial genomes are frequently applied in phylogenetic and evolutionary studies
across metazoans, yet they are still poorly represented in many groups of invertebrates …