[PDF][PDF] Machine learning in bioinformatics

P Larranaga, B Calvo, R Santana… - Briefings in …, 2006‏ - academic.oup.com
This article reviews machine learning methods for bioinformatics. It presents modelling
methods, such as supervised classification, clustering and probabilistic graphical models for …

On the importance of comprehensible classification models for protein function prediction

AA Freitas, DC Wieser… - IEEE/ACM Transactions on …, 2008‏ - ieeexplore.ieee.org
The literature on protein function prediction is currently dominated by works aimed at
maximizing predictive accuracy, ignoring the important issues of validation and …

Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligoty** database (SpolDB4) for classification, population genetics and …

K Brudey, JR Driscoll, L Rigouts, WM Prodinger… - BMC microbiology, 2006‏ - Springer
Abstract Background The Direct Repeat locus of the Mycobacterium tuberculosis complex
(MTC) is a member of the CRISPR (Clustered regularly interspaced short palindromic …

Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic …

I Filliol, AS Motiwala, M Cavatore, W Qi… - Journal of …, 2006‏ - journals.asm.org
We analyzed a global collection of Mycobacterium tuberculosis strains using 212 single
nucleotide polymorphism (SNP) markers. SNP nucleotide diversity was high (average …

Genoty** of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligoty** for molecular epidemiology and evolutionary genetics

C Sola, I Filliol, E Legrand, S Lesjean, C Locht… - Infection, genetics and …, 2003‏ - Elsevier
The recent introduction of molecular methods has gained increased acceptance as a
powerful tool for epidemiology and phylogeny of tuberculosis (TB). In this investigation, the …

High Prevalence of KatG Ser315Thr Substitution among Isoniazid-Resistant Mycobacterium tuberculosis Clinical Isolates from Northwestern Russia, 1996 to 2001

I Mokrousov, O Narvskaya, T Otten… - Antimicrobial Agents …, 2002‏ - journals.asm.org
ABSTRACT A total of 204 isoniazid (INH)-resistant strains of Mycobacterium tuberculosis
isolated from different patients in the northwestern region of Russia from 1996 to 2001 were …

Snapshot of Moving and Expanding Clones of Mycobacterium tuberculosis and Their Global Distribution Assessed by Spoligoty** in an International Study

I Filliol, JR Driscoll, D Van Soolingen… - Journal of Clinical …, 2003‏ - journals.asm.org
The present update on the global distribution of Mycobacterium tuberculosis complex
spoligotypes provides both the octal and binary descriptions of the spoligotypes for M …

Global distribution of Mycobacterium tuberculosis spoligotypes

I Filliol, JR Driscoll, D Van Soolingen… - Emerging infectious …, 2002‏ - pmc.ncbi.nlm.nih.gov
We present a short summary of recent observations on the global distribution of the major
clades of the Mycobacterium tuberculosis complex, the causative agent of tuberculosis. This …

An effective application of decision tree to stock trading

MC Wu, SY Lin, CH Lin - Expert Systems with applications, 2006‏ - Elsevier
This paper presents a stock trading method by combining the filter rule and the decision tree
technique. The filter rule, having been widely used by investors, is used to generate …

[PDF][PDF] From basic science to patient care

JC Palomino, LSCRV Tuberculosis - Tuberculosistextbook. com …, 2007‏ - researchgate.net
Tuberculosis is an ever-changing field. The editors and authors of “Tuberculosis 2007–from
basic science to patient care” have made every effort to provide information that is accurate …