[HTML][HTML] Insertions and deletions in protein evolution and engineering

S Savino, T Desmet, J Franceus - Biotechnology Advances, 2022 - Elsevier
Protein evolution or engineering studies are traditionally focused on amino acid
substitutions and the way these contribute to fitness. Meanwhile, the insertion and deletion …

The frequency of sex in fungi

BPS Nieuwenhuis, TY James - … Transactions of the …, 2016 - royalsocietypublishing.org
Fungi are a diverse group of organisms with a huge variation in reproductive strategy. While
almost all species can reproduce sexually, many reproduce asexually most of the time …

[HTML][HTML] Species boundaries in the human pathogen Paracoccidioides

DA Turissini, OM Gomez, MM Teixeira… - Fungal Genetics and …, 2017 - Elsevier
The use of molecular taxonomy for identifying recently diverged species has transformed the
study of speciation in fungi. The pathogenic fungus Paracoccidioides spp has been …

Direct estimate of the rate of germline mutation in a bird

L Smeds, A Qvarnström, H Ellegren - Genome research, 2016 - genome.cshlp.org
The fidelity of DNA replication together with repair mechanisms ensure that the genetic
material is properly copied from one generation to another. However, on extremely rare …

Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus

M Habig, C Lorrain, A Feurtey, J Komluski… - Nature …, 2021 - nature.com
Mutations are the source of genetic variation and the substrate for evolution. Genome-wide
mutation rates appear to be affected by selection and are probably adaptive. Mutation rates …

Antibiotic treatment enhances the genome-wide mutation rate of target cells

H Long, SF Miller, C Strauss, C Zhao, L Cheng… - Proceedings of the …, 2016 - pnas.org
Although it is well known that microbial populations can respond adaptively to challenges
from antibiotics, empirical difficulties in distinguishing the roles of de novo mutation and …

[BUCH][B] Population genetics

MB Hamilton - 2021 - books.google.com
Now updated for its second edition, Population Genetics is the classic, accessible
introduction to the concepts of population genetics. Combining traditional conceptual …

Extensive sampling of Saccharomyces cerevisiae in Taiwan reveals ecology and evolution of predomesticated lineages

TJ Lee, YC Liu, WA Liu, YF Lin, HH Lee… - Genome …, 2022 - genome.cshlp.org
The ecology and genetic diversity of the model yeast Saccharomyces cerevisiae before
human domestication remain poorly understood. Taiwan is regarded as part of this yeast's …

The genome-wide rate and spectrum of spontaneous mutations differ between haploid and diploid yeast

NP Sharp, L Sandell, CG James, SP Otto - Proceedings of the National …, 2018 - pnas.org
By altering the dynamics of DNA replication and repair, alternative ploidy states may
experience different rates and types of new mutations, leading to divergent evolutionary …

Old trade, new tricks: insights into the spontaneous mutation process from the partnering of classical mutation accumulation experiments with high-throughput …

V Katju, U Bergthorsson - Genome biology and evolution, 2019 - academic.oup.com
Mutations spawn genetic variation which, in turn, fuels evolution. Hence, experimental
investigations into the rate and fitness effects of spontaneous mutations are central to the …