Machine learning for the study of plankton and marine snow from images

JO Irisson, SD Ayata, DJ Lindsay… - Annual Review of …, 2022 - annualreviews.org
Quantitative imaging instruments produce a large number of images of plankton and marine
snow, acquired in a controlled manner, from which the visual characteristics of individual …

Harmful algal blooms and climate change: Learning from the past and present to forecast the future

ML Wells, VL Trainer, TJ Smayda, BSO Karlson… - Harmful algae, 2015 - Elsevier
Climate change pressures will influence marine planktonic systems globally, and it is
conceivable that harmful algal blooms may increase in frequency and severity. These …

Automated plankton image analysis using convolutional neural networks

JY Luo, JO Irisson, B Graham… - Limnology and …, 2018 - Wiley Online Library
The rise of in situ plankton imaging systems, particularly high‐volume imagers such as the In
Situ Ichthyoplankton Imaging System, has increased the need for fast processing and …

Big or small, patchy all: Resolution of marine plankton patch structure at micro-to submesoscales for 36 taxa

KL Robinson, S Sponaugle, JY Luo, MR Gleiber… - Science …, 2021 - science.org
Despite the ecological importance of microscale (0.01–1 meter) and fine-scale (1 to
hundreds of meters) plankton patchiness, the dimensions and taxonomic identity of patches …

[HTML][HTML] The case of the diatoms and the muddled mandalas: Time to recognize diatom adaptations to stratified waters

AES Kemp, TA Villareal - Progress in Oceanography, 2018 - Elsevier
Abstract Models used to predict future ocean ecosystem and biogeochemical behaviour
depend on simplified ecological frameworks allowing the definition of plankton functional …

Surface slicks are pelagic nurseries for diverse ocean fauna

JL Whitney, JM Gove, MA McManus, KA Smith… - Scientific reports, 2021 - nature.com
Most marine animals have a pelagic larval phase that develops in the coastal or open
ocean. The fate of larvae has profound effects on replenishment of marine populations that …

Environmental drivers of the fine-scale distribution of a gelatinous zooplankton community across a mesoscale front

JY Luo, B Grassian, D Tang, JO Irisson… - Marine Ecology …, 2014 - int-res.com
Mesoscale fronts occur frequently in many coastal areas and often are sites of elevated
productivity; however, knowledge of the fine-scale distribution of zooplankton at these fronts …

Three-dimensional cross-shelf zooplankton distributions off the Central Oregon Coast during anomalous oceanographic conditions

C Briseño-Avena, MS Schmid, K Swieca… - Progress in …, 2020 - Elsevier
Abstract The Northern California Current (NCC) is a complex, dynamic system experiencing
distinctly different levels of upwelling and downwelling, ranging from intermittent upwelling …

The future of fisheries oceanography lies in the pursuit of multiple hypotheses

JA Hare - ICES Journal of Marine Science, 2014 - academic.oup.com
Fisheries oceanography is largely an applied discipline with a major goal of improving
fisheries management and marine conservation. Johan Hjort's critical period hypothesis …

Imperfect automatic image classification successfully describes plankton distribution patterns

R Faillettaz, M Picheral, JY Luo, C Guigand… - Methods in …, 2016 - Elsevier
Imaging systems were developed to explore the fine scale distributions of plankton (< 10 m),
but they generate huge datasets that are still a challenge to handle rapidly and accurately …