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A comprehensive review of m6A/m6Am RNA methyltransferase structures
S Oerum, V Meynier, M Catala, C Tisné - Nucleic acids research, 2021 - academic.oup.com
Gene expression is regulated at many levels including co-or post-transcriptionally, where
chemical modifications are added to RNA on riboses and bases. Expression control via RNA …
chemical modifications are added to RNA on riboses and bases. Expression control via RNA …
A post-genomic view of the ecophysiology, catabolism and biotechnological relevance of sulphate-reducing prokaryotes
R Rabus, SS Venceslau, L Wöhlbrand… - Advances in microbial …, 2015 - Elsevier
Dissimilatory sulphate reduction is the unifying and defining trait of sulphate-reducing
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …
Mutant phenotypes for thousands of bacterial genes of unknown function
One-third of all protein-coding genes from bacterial genomes cannot be annotated with a
function. Here, to investigate the functions of these genes, we present genome-wide mutant …
function. Here, to investigate the functions of these genes, we present genome-wide mutant …
Systematic assessment of secondary bile acid metabolism in gut microbes reveals distinct metabolic capabilities in inflammatory bowel disease
Background The human gut microbiome performs important functions in human health and
disease. A classic example for host-gut microbial co-metabolism is host biosynthesis of …
disease. A classic example for host-gut microbial co-metabolism is host biosynthesis of …
Functional genetics of human gut commensal Bacteroides thetaiotaomicron reveals metabolic requirements for growth across environments
Harnessing the microbiota for beneficial outcomes is limited by our poor understanding of
the constituent bacteria, as the functions of most of their genes are unknown. Here, we …
the constituent bacteria, as the functions of most of their genes are unknown. Here, we …
gutMDisorder: a comprehensive database for dysbiosis of the gut microbiota in disorders and interventions
Abstract gutMDisorder (http://bio-annotation. cn/gutMDisorder), a manually curated
database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in …
database, aims at providing a comprehensive resource of dysbiosis of the gut microbiota in …
Glycolytic strategy as a tradeoff between energy yield and protein cost
Contrary to the textbook portrayal of glycolysis as a single pathway conserved across all
domains of life, not all sugar-consuming organisms use the canonical Embden–Meyerhoff …
domains of life, not all sugar-consuming organisms use the canonical Embden–Meyerhoff …
EDGAR 2.0: an enhanced software platform for comparative gene content analyses
The rapidly increasing availability of microbial genome sequences has led to a growing
demand for bioinformatics software tools that support the functional analysis based on the …
demand for bioinformatics software tools that support the functional analysis based on the …
Engineering dynamic pathway regulation using stress-response promoters
Heterologous pathways used in metabolic engineering may produce intermediates toxic to
the cell. Dynamic control of pathway enzymes could prevent the accumulation of these …
the cell. Dynamic control of pathway enzymes could prevent the accumulation of these …
RegPrecise 3.0–a resource for genome-scale exploration of transcriptional regulation in bacteria
Background Genome-scale prediction of gene regulation and reconstruction of
transcriptional regulatory networks in prokaryotes is one of the critical tasks of modern …
transcriptional regulatory networks in prokaryotes is one of the critical tasks of modern …