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The mathematics of cancer: integrating quantitative models
Mathematical modelling approaches have become increasingly abundant in cancer
research. The complexity of cancer is well suited to quantitative approaches as it provides …
research. The complexity of cancer is well suited to quantitative approaches as it provides …
Punctuated copy number evolution and clonal stasis in triple-negative breast cancer
R Gao, A Davis, TO McDonald, E Sei, X Shi, Y Wang… - Nature …, 2016 - nature.com
Aneuploidy is a hallmark of breast cancer; however, knowledge of how these complex
genomic rearrangements evolve during tumorigenesis is limited. In this study, we developed …
genomic rearrangements evolve during tumorigenesis is limited. In this study, we developed …
Computational cancer biology: an evolutionary perspective
N Beerenwinkel, CD Greenman… - PLoS computational …, 2016 - journals.plos.org
Cancer is a leading cause of death worldwide and represents one of the biggest biomedical
research challenges of our time. Tumor progression is caused by somatic evolution of cell …
research challenges of our time. Tumor progression is caused by somatic evolution of cell …
[HTML][HTML] Uncovering the subtype-specific disease module and the development of drug response prediction models for glioma
The poor prognosis of glioma patients brought attention to the need for effective therapeutic
approaches for precision therapy. Here, we deployed algorithms relying on network …
approaches for precision therapy. Here, we deployed algorithms relying on network …
An agent-based model of triple-negative breast cancer: the interplay between chemokine receptor CCR5 expression, cancer stem cells, and hypoxia
Background Triple-negative breast cancer lacks estrogen, progesterone, and HER2
receptors and is thus not possible to treat with targeted therapies for these receptors …
receptors and is thus not possible to treat with targeted therapies for these receptors …
Targeted cancer therapy: vital oncogenes and a new molecular genetic paradigm for cancer initiation progression and treatment
RE Willis - International journal of molecular sciences, 2016 - mdpi.com
It has been declared repeatedly that cancer is a result of molecular genetic abnormalities.
However, there has been no working model describing the specific functional consequences …
However, there has been no working model describing the specific functional consequences …
On measuring selection in cancer from subclonal mutation frequencies
Recently available cancer sequencing data have revealed a complex view of the cancer
genome containing a multitude of mutations, including drivers responsible for cancer …
genome containing a multitude of mutations, including drivers responsible for cancer …
LNDriver: identifying driver genes by integrating mutation and expression data based on gene-gene interaction network
PJ Wei, D Zhang, J **a, CH Zheng - BMC bioinformatics, 2016 - Springer
Background Cancer is a complex disease which is characterized by the accumulation of
genetic alterations during the patient's lifetime. With the development of the next-generation …
genetic alterations during the patient's lifetime. With the development of the next-generation …
A critical discussion on diet, genomic mutations and repair mechanisms in colon carcinogenesis
Colon cancer is one of the most common malignancies and its etiology closely tied to dietary
habits. Recent epidemiological data shows that colon cancer incidence is shifting to a much …
habits. Recent epidemiological data shows that colon cancer incidence is shifting to a much …
Unraveling the role of low-frequency mutated genes in breast cancer
E Lusito, B Felice, G D'Ario, A Ogier, F Montani… - …, 2019 - academic.oup.com
Motivation Breast cancer is the most commonly diagnosed malignancy in women and the
second cause of cancer death in developed countries. While advancements in early …
second cause of cancer death in developed countries. While advancements in early …