Ecology of prokaryotic viruses

MG Weinbauer - FEMS microbiology reviews, 2004 - academic.oup.com
The finding that total viral abundance is higher than total prokaryotic abundance and that a
significant fraction of the prokaryotic community is infected with phages in aquatic systems …

Ammonia-oxidizing bacteria: a model for molecular microbial ecology

GA Kowalchuk, JR Stephen - Annual Reviews in Microbiology, 2001 - annualreviews.org
▪ Abstract The eutrophication of many ecosystems in recent decades has led to an increased
interest in the ecology of nitrogen transformation. Chemolitho-autotrophic ammonia …

[HTML][HTML] Tumor-resident intracellular microbiota promotes metastatic colonization in breast cancer

A Fu, B Yao, T Dong, Y Chen, J Yao, Y Liu, H Li, H Bai… - Cell, 2022 - cell.com
Tumor-resident intracellular microbiota is an emerging tumor component that has been
documented for a variety of cancer types with unclear biological functions. Here, we …

Gut microbiota signatures are associated with toxicity to combined CTLA-4 and PD-1 blockade

MC Andrews, CPM Duong, V Gopalakrishnan… - Nature medicine, 2021 - nature.com
Abstract Treatment with combined immune checkpoint blockade (CICB) targeting CTLA-4
and PD-1 is associated with clinical benefit across tumor types, but also a high rate of …

Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota

M Vétizou, JM Pitt, R Daillère, P Lepage, N Waldschmitt… - Science, 2015 - science.org
Antibodies targeting CTLA-4 have been successfully used as cancer immunotherapy. We
find that the antitumor effects of CTLA-4 blockade depend on distinct Bacteroides species. In …

Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set

MA Nadkarni, FE Martin, NA Jacques… - …, 2002 - microbiologyresearch.org
The design and evaluation of a set of universal primers and probe for the amplification of
16S rDNA from the Domain Bacteria to estimate total bacterial load by real-time PCR is …

Antibiotic resistance genes as emerging contaminants: studies in northern Colorado

A Pruden, R Pei, H Storteboom… - Environmental science & …, 2006 - ACS Publications
This study explores antibiotic resistance genes (ARGs) as emerging environmental
contaminants. The purpose of this study was to investigate the occurrence of ARGs in …

Group‐specific primer and probe sets to detect methanogenic communities using quantitative real‐time polymerase chain reaction

Y Yu, C Lee, J Kim, S Hwang - Biotechnology and …, 2005 - Wiley Online Library
Real‐time polymerase chain reaction (PCR) is a highly sensitive method that can be used
for the detection and quantification of microbial populations without cultivating them in …

Low Counts of Faecalibacterium prausnitzii in Colitis Microbiota

H Sokol, P Seksik, JP Furet, O Firmesse… - Inflammatory bowel …, 2009 - academic.oup.com
Background The intestinal microbiota is suspected to play a role in colitis and particularly in
inflammatory bowel disease (IBD) pathogenesis. The aim was to compare the fecal …

Bacterial chemolithoautotrophy via manganese oxidation

H Yu, JR Leadbetter - Nature, 2020 - nature.com
Manganese is one of the most abundant elements on Earth. The oxidation of manganese
has long been theorized—yet has not been demonstrated,–—to fuel the growth of …