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DynaMut2: Assessing changes in stability and flexibility upon single and multiple point missense mutations
Predicting the effect of missense variations on protein stability and dynamics is important for
understanding their role in diseases, and the link between protein structure and function …
understanding their role in diseases, and the link between protein structure and function …
Systematic evaluation of computational tools to predict the effects of mutations on protein stability in the absence of experimental structures
Abstract Changes in protein sequence can have dramatic effects on how proteins fold, their
stability and dynamics. Over the last 20 years, pioneering methods have been developed to …
stability and dynamics. Over the last 20 years, pioneering methods have been developed to …
The expanding phenotypes of cohesinopathies: one ring to rule them all!
Preservation and development of life depend on the adequate segregation of sister
chromatids during mitosis and meiosis. This process is ensured by the cohesin multi-subunit …
chromatids during mitosis and meiosis. This process is ensured by the cohesin multi-subunit …
DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability
Proteins are highly dynamic molecules, whose function is intrinsically linked to their
molecular motions. Despite the pivotal role of protein dynamics, their computational …
molecular motions. Despite the pivotal role of protein dynamics, their computational …
mCSM-PPI2: predicting the effects of mutations on protein–protein interactions
Protein–protein Interactions are involved in most fundamental biological processes, with
disease causing mutations enriched at their interfaces. Here we present mCSM-PPI2, a …
disease causing mutations enriched at their interfaces. Here we present mCSM-PPI2, a …
SDM: a server for predicting effects of mutations on protein stability
AP Pandurangan, B Ochoa-Montano… - Nucleic acids …, 2017 - academic.oup.com
Here, we report a webserver for the improved SDM, used for predicting the effects of
mutations on protein stability. As a pioneering knowledge-based approach, SDM has been …
mutations on protein stability. As a pioneering knowledge-based approach, SDM has been …
Frequent transmission of the Mycobacterium tuberculosis Bei**g lineage and positive selection for the EsxW Bei**g variant in Vietnam
To examine the transmission dynamics of Mycobacterium tuberculosis (Mtb) isolated from
tuberculosis patients in Ho Chi Minh City, Vietnam, we sequenced the whole genomes of …
tuberculosis patients in Ho Chi Minh City, Vietnam, we sequenced the whole genomes of …
ThermoMutDB: a thermodynamic database for missense mutations
Proteins are intricate, dynamic structures, and small changes in their amino acid sequences
can lead to large effects on their folding, stability and dynamics. To facilitate the further …
can lead to large effects on their folding, stability and dynamics. To facilitate the further …
mmCSM-PPI: predicting the effects of multiple point mutations on protein–protein interactions
Protein–protein interactions play a crucial role in all cellular functions and biological
processes and mutations leading to their disruption are enriched in many diseases. While a …
processes and mutations leading to their disruption are enriched in many diseases. While a …
mCSM-membrane: predicting the effects of mutations on transmembrane proteins
Significant efforts have been invested into understanding and predicting the molecular
consequences of mutations in protein coding regions, however nearly all approaches have …
consequences of mutations in protein coding regions, however nearly all approaches have …